Sordaria macrospora: SMAC_00733
Help
Entry
SMAC_00733 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
smp
Sordaria macrospora
Pathway
smp03022
Basal transcription factors
smp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SMAC_00733
09124 Replication and repair
03420 Nucleotide excision repair
SMAC_00733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
SMAC_00733
03400 DNA repair and recombination proteins [BR:
smp03400
]
SMAC_00733
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SMAC_00733
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SMAC_00733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
10807363
NCBI-ProteinID:
XP_003349845
UniProt:
F7VMX8
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MSLGGQQLLEYLEKLPGTAFRRLYQSPATALAIFRRMLSHHAKVIVRGLLYMPDPFPLTS
LDIWFPPESGGKIHRDRTIAALRSLHVLQVSPPGKDRTQEIQITTSFKKGLQLAFEGGGE
DGSFGVPSSLPVDPTIDIGYLDKYARKKWDDILHYVVNSLGVQSSSEGVSGPKASVKELL
LAGRLVERRPDTRTGIGITQAGFTFLLQESNAQVWTLLLLWLEAADHAADSGMDSIDMLS
FLFMLSSLELGTAYDTSALTETRRNMLPSLVDFGLIYFPRDTRQFFPTRLATTLTSTASA
LRTVSSAFTAATANPSGEPGTTTSTSGGPAGATPADKTGTSKGIIIETNYRIYAYTTSPL
QIAVLALFCQLNMRFPNMVSAALRAIGFGITADQIISYLHAHAHQQMVREATVTGKTVLP
PTVVDQIRLWQLENERMQTTAGFLFKDFESTEEYAALSRYAEEIGVLVWKNDKRQLFFAS
KHEQLRDYLKSRKKGE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcggcggacaacagctcctggagtacctggagaagctgcctgggacagctttt
aggaggctataccagtcacccgcaacagctctggctatcttccgccgaatgctgtctcac
catgccaaggttattgtccgaggcctactctacatgccggacccgttccctctaacatcc
ctcgacatatggttccctccagagtccggtgggaagatacaccgcgatcgcaccatagcc
gctctacgatccctccacgtcctacaggtctcaccgccgggtaaggaccggacccaagaa
atccaaatcacaacaagcttcaagaagggcctacaactggccttcgaaggtggcggcgaa
gatggtagctttggtgttcccagttctctgcccgtcgatcccaccatcgatatcggctac
ctcgacaagtacgcccgcaagaagtgggacgacatcctccactatgtcgtcaacagtctc
ggagtccaaagcagttccgaaggggtgagcggtcccaaggccagcgttaaggaactgctc
ctggccggtcgcctcgtcgaacgccgtcccgacacccgaacaggcattggcattacgcaa
gctggtttcacattcctccttcaggagtccaacgcccaagtatggactttgcttctcctc
tggctcgaagcagctgaccacgcggccgactcgggcatggacagcatcgacatgctctct
ttcctcttcatgctatcctcgctcgagctcggcaccgcctacgacacctcagccctaacc
gaaacccggcggaatatgcttccctcgctcgtcgacttcgggctgatctacttcccgcgc
gacacgcggcagttcttccctacccgcctcgccacaaccctaaccagcaccgcctcggcc
ctgcgcaccgtctcctcggccttcaccgccgcgacagctaacccttccggcgaaccaggc
acgacgaccagcaccagcggcggtccggccggcgccacccccgccgataaaaccggcaca
tcaaagggcatcatcatcgagaccaattaccgcatctacgcttacaccacctcgcccctc
caaattgccgtcctggctctcttctgccagcttaacatgcgtttccccaacatggtctcg
gccgccttacgcgctatcggcttcggcatcacagccgaccagatcatttcctacctgcac
gcccatgcccatcagcagatggttagggaagccactgtgacgggcaagacggtgttgccg
ccgacggtggtggaccagatccgactttggcagctggagaatgagcggatgcagacgacg
gcgggattcctgttcaaggactttgagagcacggaggagtatgcggcgctgtcgagatac
gccgaggagattggcgtgctggtatggaagaatgataagcggcagctgttctttgctagt
aagcatgagcagttgagagattatttgaagagtcggaagaagggggagtag
DBGET
integrated database retrieval system
