Sordaria macrospora: SMAC_02013
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Entry
SMAC_02013 CDS
T01610
Symbol
putative_rad23
Name
(RefSeq) putative RAD23 protein
KO
K10839
UV excision repair protein RAD23
Organism
smp
Sordaria macrospora
Pathway
smp03420
Nucleotide excision repair
smp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SMAC_02013 (putative_rad23)
09124 Replication and repair
03420 Nucleotide excision repair
SMAC_02013 (putative_rad23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smp03051
]
SMAC_02013 (putative_rad23)
03400 DNA repair and recombination proteins [BR:
smp03400
]
SMAC_02013 (putative_rad23)
Proteasome [BR:
smp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
SMAC_02013 (putative_rad23)
DNA repair and recombination proteins [BR:
smp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
SMAC_02013 (putative_rad23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
Rad60-SLD_2
Ubiquitin_5
Dsc3_N
Clathrin_H_link
Motif
Other DBs
NCBI-GeneID:
10806475
NCBI-ProteinID:
XP_024511197
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MKVTFKDLKQQKFTLEIEPTETIAKVKAKISEERGWAPELQKLIYSGKILKDEETVESYK
IEEKGFVVCVVNKPKTTAPKPAESSSSAPTPIPPLPLLRPLHPLLLLLXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAMGEQRA
EAIANMEAMGFERSQIDAAMRAAYNNPERAVEYLLNGIPANLQQQAASSRQPSAAPAAAP
AAAPAAAPAAAPAAQAASPAAAAGGDDEGPVNLFDLAAQLGNSAGGRGARGAEGAGAEAA
GLGNLDFLRNNAQFQQMRQLVQEQPQMLEPILQQLGAGNPQLAQMIAQNSDQFLNLLGEG
GEGGSVGIAVTEEERDAIERLTRLGFPQDQAIQAYFACDKDEELAANFLFDQGPEEDDDM
PQQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcactttcaaggacctcaagcaacaaaagttcacgctcgagatcgagcctacc
gagaccattgccaaggtcaaggcgaagatctccgaggagaggggctgggctcccgagctg
cagaagctcatctactccggcaagatcttgaaggatgaggaaaccgtcgagagctacaag
attgaggagaagggcttcgttgtctgcgtcgtaaacaagcccaagaccactgcccccaag
ccggccgagtcgtcatcgtctgctcccaccccgatacccccgctgccgctgcttcggccc
ctacacccgctgctcctgctgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttgcgatgggcgagcagcgagct
gaggccattgccaacatggaggccatgggcttcgagcgttcgcagattgacgctgctatg
cgtgctgcgtataacaaccctgagcgcgcggtcgagtacctcctaaatggtattcccgcc
aaccttcaacaacaggctgcctcctctcgtcagccttctgccgctccggctgccgctcct
gctgctgcccctgctgctgcccctgctgctgcccctgccgctcaggccgcttctcccgct
gctgccgccggtggtgacgacgagggtccagtcaaccttttcgacctcgctgcccaactt
ggcaacagcgctggtggacgtggtgctcgtggtgctgagggtgctggtgctgaggccgct
ggtcttggcaacctcgacttcctccggaacaacgcccagtttcagcaaatgcgccagctt
gtgcaggagcagccccagatgttggagcccatcttgcagcaactcggtgctggcaacccc
cagctcgctcagatgatcgcccaaaactccgatcagttcctcaacctactcggcgagggt
ggtgagggtggctctgtcggcattgccgtcacggaggaggagcgcgatgctattgagcgt
ctcactcgcctcggcttcccccaggaccaggccatccaggcctactttgcctgcgacaag
gacgaagagcttgccgccaacttccttttcgatcagggaccggaggaggatgacgatatg
ccccaacaatag
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integrated database retrieval system
