Sordaria macrospora: SMAC_02403
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Entry
SMAC_02403 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
smp
Sordaria macrospora
Pathway
smp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
SMAC_02403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
SMAC_02403
03019 Messenger RNA biogenesis [BR:
smp03019
]
SMAC_02403
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
SMAC_02403
Messenger RNA biogenesis [BR:
smp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
SMAC_02403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CFIA_Pcf11
Motif
Other DBs
NCBI-GeneID:
10808294
NCBI-ProteinID:
XP_003350733
UniProt:
F7VPG9
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MTTDAAADVAEDYRQALEDLTVNSRIEIATLTNIARENAIHGLAIADVLTNHIKKVPPTR
TLPALYVLDSIVKNAPTPYALYFGPKLYSIFMGAYTKVDTPTRRKMDEMLKTWKEPVAGA
LGNKPVFPPEVVKPIENALIAAKNVALQVNQSSFQGQQYMLRGARPPAPPHRDTPTPPQS
PYHQPQAPPHQGISIERLRDDIQQLIVAERAEFARDPLDVGKQTRLKALLDLQTLIQRPD
VPQEQLMLVKEKITELSVNMRSSVATAAAGVVPVAAPPHHYNPVPYTATPTPPVIPGAVV
PPPPQVPGVGRPASAMAVPGPGAAPGAGGALSLDSLFGQGALAALLAGATRKSATPTPSQ
TSTPQPPIATPMIPPPAVPPVAAGIPVPAPSAAGSLAALNPALAAVLRSQTPTMAPTATA
SSITNNPSALLAMLRQSGLLSGAAGTSTTPVSVVPTPVAPAAAWTYTLKQYRGPHLINRL
HEDLGPPCTQCGRRFGIDEEGRRKKTAHMDWHFRVHQRVTDAERRGQHRSWWVEQSDWAN
SSEAIDIDHSHRSDAATHPSGGHGGGVPGQDTLNYDDDVDDDDYDPEANFNSSYNNADSL
YPGGGAAAGGGDHSGGGHGHASSGKATANRKGGKRGGGGLNYIPVPEDSAKVNNMCPICQ
EKFEMKWLDEAQEWVWMDATKVGGRVYHASCHKEVNGSGAVGGDGGGGSNGMMGMSMGMG
MSGGGENGFGGGRKRKAEDDAYSGAKGRIKLEY
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacgcggccgctgatgttgctgaggactaccggcaagccctggaggacttg
accgtaaactcaaggatagagatcgcgactttgacgaatattgcgcgagaaaacgccatt
catggtctggccattgctgatgtcttgacaaaccacatcaaaaaggtcccacctacacga
acactaccggccctctatgtgctcgactcgatcgtcaagaatgccccgacaccatatgcc
ctctacttcgggcctaagctctactccatcttcatgggcgcctataccaaagtcgacact
ccaaccagacgcaagatggacgagatgctgaagacctggaaggagccagtggcgggcgcg
ttaggcaacaagcccgtgttccctcccgaggtggtcaagccgattgagaacgccttgatc
gcggccaagaatgttgcccttcaggtcaaccagagcagttttcaagggcagcagtatatg
ctccgcggagcccgtcctccagcccctcctcacagagatacgcccactcctccccaatct
ccttatcaccagccccaggctcctcctcatcagggtataagcatagagaggttaagagac
gatatccagcagctcatcgttgcagagagggccgagtttgcgcgggatccgctggacgta
ggtaaacaaactagactgaaggccttgctggatctgcagaccttgattcagaggccagat
gtgccgcaggagcagttaatgctcgtgaaagaaaagatcactgaactgtccgtaaacatg
cgcagcagcgttgctactgccgctgctggcgtagttcccgtcgccgcccctcctcaccat
tacaatcccgttccatacaccgctaccccaacacctccggtcatccccggtgctgttgtt
cctcctcctcctcaagtacccggggttggacgtcctgcttctgccatggccgtgccgggt
ccgggagctgctccaggcgccggaggtgccctgtcgctagactctttgttcggacaaggc
gctctcgccgccttactggctggtgctacccgaaagtctgccacccctacaccatcgcag
acgagcacgccacagcctcccatcgcgacgccgatgataccaccaccggctgtgccaccg
gtagcagctggaattcctgttccggctccctctgccgctggcagcctggcagccttaaac
cccgccctcgcggccgtcctccgatcacaaacaccaacaatggcaccgacagcgacagca
tcatcaatcaccaacaacccgtcagccttactcgccatgctccgacaatctggtcttctc
tccggcgctgccggtactagcaccactcccgtgtccgtcgtcccaactcccgtagcaccc
gccgccgcctggacctacaccctcaaacaataccgcggcccacacctcatcaaccgactg
cacgaagacctcggtccgccctgcacgcagtgcggccgccgcttcggtatcgacgaggaa
ggccggcgcaagaagacggcgcacatggactggcacttccgggtgcaccagcgggtgacg
gacgcggagcggcgcggccagcaccgtagttggtgggtggagcagagcgactgggcgaat
tcttcagaagctattgatattgatcacagccatcgctccgatgccgccactcatccatct
ggaggtcatggcggtggtgtgccagggcaggacacgcttaactacgatgacgatgtggat
gatgatgattacgatcccgaagcaaactttaatagctcatacaacaacgccgactcattg
tacccaggcggcggtgctgctgccggtggtggggaccattcgggaggcggtcatggtcat
gcttcttctgggaaagccacggctaataggaaggggggcaaaaggggcggcggcggtctc
aactacatccccgttcccgaggactcggcaaaggtcaacaacatgtgccccatctgccag
gaaaagttcgagatgaagtggctggatgaggcgcaggagtgggtgtggatggacgctacg
aaagtgggcgggagggtgtatcatgctagttgccacaaggaggtgaatggcagcggcgct
gttggtggggatggtggtggtggcagcaatgggatgatgggcatgagcatgggcatgggc
atgagtggaggaggggagaacggatttgggggagggaggaagaggaaggccgaggacgat
gcttattcaggagcaaagggaaggataaagttggaatattaa
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