Sordaria macrospora: SMAC_06743
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Entry
SMAC_06743 CDS
T01610
Name
(RefSeq) uncharacterized protein
KO
K15218
RNA polymerase I-specific transcription initiation factor RRN6
Organism
smp
Sordaria macrospora
Brite
KEGG Orthology (KO) [BR:
smp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smp03021
]
SMAC_06743
Transcription machinery [BR:
smp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
SMAC_06743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn6_beta-prop
Rrn6_K-rich
Rrn6_HB
Motif
Other DBs
NCBI-GeneID:
10802290
NCBI-ProteinID:
XP_024511126
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MADRHGHTRPVGRTHAMSRPRAHAGGIVGRLTYIPAQINKGTGQLRKDRARDEIPQFQQV
TPFNQWSAPTKTALPDLASLGPSQLAKSQNNWLLKTLPEAFLGDVDTETLLIDEISNTYS
TTHPPPPPTASLLATGEITDVRDPDRVKGHTVLATASGESGHVLRLISLAREEWSWTDED
VKIRLHVPNHHLEGDWCQDSVPISLIKFVNDSKKYDQVRWLIVQKPTSTTVCEPELRKLP
VQSSSSIPSTSSPLTQLVANPLFTITSDRCGGGSHSDVSFNLSDEQVPQLAIIDQAGYWS
VWDIVGRRGARPKVMKPVLRMCGNINLGFIPKFPDRTADDQEPHRIMWLSLRRDRSNDEG
RPGSRSKSSSRDKSRQRLSRASLLLLGNSTTLCLFDMETRKSEEQPHLLSAKRGERLLDL
APSHLDPSQAFLLTNTTISWFSVKEHGPRLRLEPLVFSPHRRDVQDPALRLEVSPGTFID
GALACFVSIRSSRNGEITVFWFISPSSGKPLRYHRESVRLKASSKSISVAMLPVERRVGQ
AKLTAPLARALAKRQTRFFQLVTLGHDLDLGCSLCMWSDEPGVRVRPPDECVGRSGFASE
KVRLREQLRDAFALPDEFDDRSLAGGSRSPELGRGSSGTLKREPDTLSLVVCGRALADRL
VVPLTSNEARPSQNEDDITRIAEVISRETNNGYMPRQSLLDLVKQTRGVQDVVRLASHWS
SHQHLLLEDVPGRLVPTNGRHVLSDDLDRAFERLMKMFSHLPSKRGKPSQGAPIPKLQLL
AAETLLSEAGVAAVPEEWAAAEPWDGTSSQSQPFASSMPFGSSPPLFSSQVHSQFIPPSQ
SQSQSQGYDPTQSQEQPGGEDAVGVRLRQYAAMNPVSRRIGGRTRVTSHWELGEDPNVVT
WKPGRDDEEDDADLRRRRKLEAKRKKREKLLARIRGVEAVKAESQPLPFAIQSSQLRGFA
FTQNSQPESSQFFASQPMSQIVAGPHGGRPSHVKKKQKVKKRMGFR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcgacatggtcatacccgccccgtcggccgcacccatgctatgagtcgccct
cgcgctcatgctggtggtatcgtcgggcggttgacctacattcccgctcaaatcaacaaa
ggcactggtcaacttcgcaaagatcgtgccagagatgagattcctcaattccaacaagtg
acgcctttcaatcagtggtccgcgcccaccaagacagcccttcctgacctcgccagcttg
ggtccatcccaacttgccaagtctcagaacaactggctccttaaaactctcccagaggct
tttctcggagatgtcgataccgagacgctgctcatcgatgagatcagcaacacgtactcg
accactcatcccccgccgccacccaccgcctcccttctggctactggagagatcaccgat
gtcagagaccctgatagagtcaagggtcacacggttctcgctactgctagtggagagtcg
gggcacgttcttcgcttgatcagtctcgcccgtgaagagtggagctggacagatgaagat
gttaagattcgtcttcacgtcccgaaccaccatctcgaaggagactggtgccaggatagc
gttccgatttcattgatcaagttcgtcaatgacagcaagaagtacgaccaggttcgctgg
ctcattgttcagaaacctacttcaaccacggtctgcgaacctgaactcagaaagctgccg
gtgcaaagctcatcctccatcccatcaacttcctcgcccctgacgcaacttgttgccaac
cccttgttcaccatcacatccgatcgatgcggagggggttctcactcggacgtctccttc
aatctttctgatgagcaggtacctcagcttgccatcattgatcaagccggatattggagc
gtatgggatattgttggccgtcgaggtgcacggcccaaggtgatgaagccggtactgaga
atgtgcggcaacatcaacctagggttcatcccaaagttccctgacaggacagcagatgat
caggaaccacatagaatcatgtggttgtctctgagaagggacagatccaatgatgaaggt
cgtccaggaagtcggtcaaagagttcctcgcgcgacaagtcgaggcaacgtctgtctcgg
gctagcttgcttctcctcggaaacagcactactctttgccttttcgacatggaaactcgc
aagtccgaggagcagcctcatctgctgtcagcaaagaggggcgaacgtctcttggatctc
gccccttcgcacttggatccgtcacaggccttccttctcacgaacacaaccatctcatgg
ttctctgtcaaagaacatggccctagactgcggcttgagccacttgtcttttcacctcac
cgaagggacgtccaagatccggcactgaggctcgaggtgtctccaggaacgttcatagat
ggtgctctggcctgtttcgtgtcgatccgttccagtcgaaatggcgaaatcaccgtcttt
tggttcatcagccccagctcaggcaagcctcttcgctaccatcgagagtcagttcgcctc
aaagcttcatccaagtccatcagtgtcgctatgcttccggtcgagcgacgagttggccaa
gcaaagctcacagcacctctcgctcgtgctcttgcgaagaggcaaaccaggttcttccag
ctggttacgctaggacacgatctggatctgggctgctcgctctgcatgtggtctgacgag
cctggtgtgcgggtgcgacctccagatgaatgcgtaggccgttctggctttgcatcggag
aaggtcaggcttcgggagcaactgcgcgatgcatttgccttaccagatgagtttgacgac
cgttccttggccggcggttcccgaagtccggaacttggccgaggttcatctggaactctg
aaaagggaaccagataccctcagtcttgtggtatgcgggcgggcattggccgacaggcta
gtggtgcccttaacatcgaacgaggcacgcccatcgcagaatgaagatgacattactcgc
atcgccgaggtcatcagtcgtgagacaaacaatggctatatgcctagacaatctctactc
gatctagtgaaacaaacaagaggtgtgcaggacgtcgttcgactcgcttcacactggtca
tcccatcaacacttgttgctcgaagatgttcctgggagactggttcccaccaatggccgt
cacgtcttgagtgatgatctagaccgggcctttgagcggttgatgaagatgttctcccat
ctcccctcaaagcgtggaaaaccgtctcaaggggctcccattcccaagttgcaactgctc
gctgccgagactctcctctctgaggccggagtagcggcagtacctgaagaatgggctgca
gcggagccttgggatggcacatcgagtcagagccagccatttgccagctctatgcctttt
ggcagctctcctcctttgttctcgtcacaagtgcactcccagttcatacccccctctcag
tcgcaatcacagtctcaaggctatgatccgacccagagtcaagaacagccgggaggtgaa
gatgcagtgggcgtgagactacgccagtacgcagccatgaatcccgtttccagaagaatt
ggcggtagaacccgggtcacgtctcactgggagctcggcgaagaccccaatgtcgtcaca
tggaagccaggtcgggacgatgaggaggatgatgctgatctcaggagaaggcgcaagctc
gaggcaaagcgcaagaagagagagaagttgctggcgaggattcgcggcgttgaagccgta
aaggcggaaagtcaacctttgccgtttgccattcagtcgagccagctgagaggttttgct
ttcacgcaaaacagtcagccggagtcgtcacagtttttcgcatcgcagccgatgtcacag
attgttgcaggaccacatggaggtaggccctcccatgtgaagaagaagcaaaaagtgaag
aagcgtatgggattcagatag
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