Skermanella mucosa: JL100_007845
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Entry
JL100_007845 CDS
T07652
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
smuc
Skermanella mucosa
Pathway
smuc01501
beta-Lactam resistance
smuc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL100_007845
01503 Cationic antimicrobial peptide (CAMP) resistance
JL100_007845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_007845
01504 Antimicrobial resistance genes [BR:
smuc01504
]
JL100_007845
Transporters [BR:
smuc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JL100_007845
Antimicrobial resistance genes [BR:
smuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JL100_007845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UEM22651
LinkDB
All DBs
Position
SKMUc:complement(1714303..1717425)
Genome browser
AA seq
1040 aa
AA seq
DB search
MVLSDVSIQRPVLAIVLNALLVVFGIFAFTKLPVREYPSVDPPVVSISTSYEGASAEVIE
TQITQVMEGAVSGVEGIKTIRSTSREGSSNVRIEFLLTRDIEGAANDVRDRVSRAARSLP
DEADAPVIAKVDSDSSPILWATLTSEQLSRLELTDYARRVLVDQITAVPGVADVRISGQR
IYAMRVWLDRSALAARNLTVQDVETALRRENAELPAGRIESAQREFTVRTDTRLSRAEQF
SRIVISQRSGDFIRLGDVARVELGTRDDRGDYTVNGRAAVGLGVTKQATANTMEVAEGVK
ALLRQVGTTLPGDAAIDVSFDESVFIAESIYQVFHALTIALGLVVLVTWAFLRDLRATII
PAVAIPVSIIAAFTVLAALGYSINVLTLLALVLAIGLVVDDAIIVVENVSRRIELGEPPL
LAAYRGAGQIGFAVIATTAVLIAVIFPLVLLQDTVGRFFKEFAVTLGASVAFSALVALTL
TPMMCSQVLRGHHGGAVFRLTERFFDGMTRAYSRVLDGVLAAPVLMLALLGALTGATWYL
FTLVPQEFTPPEDRGSFRITVTAPEGASQDFTKREMEAVERILAPYRESGEVSSVLAILN
PGWGGQTGVNRATIQVRLAPWDRRARPQSALMAELRGKLQAVPGARVAAFAGGGIARSGA
LNQVQVVLGGSSYEELAVWRDLLIDRLRDEPGFGTIQANYDETKPQLRITVDRDRAADLG
LGTRAIGETLETLVGGRTVTRFTDRGEEYDVVVQATGSDRANPRDLSNIFLRAGTSEQLV
PLSSVVTVRDVAGPSELGRVDRLRAITVTANLEGIAMGTAIDVVRKAAAEVLPGQVRLTF
DGSARELQESSAAIYFAFGMALLIAFLVLAAQFESFTLPSIVMLTVPLALFGGLAAIVAS
AMTLNIYTQIGLVMLIGLIAKNAILIVEFANQMRDEGKAMDAAIREAAATRLRPILMTSI
ATVFGAVPLAMAEGAGAESRMAIGLVIVGGVSVGSLLSLFGTPLLYSLLARRLQPIGRIR
RRIQELELQHAKPTEGLPAE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggtgctatccgacgtctcgatccagcgcccggtgctcgccatcgtgctcaacgccctg
ctggtggtcttcggcatcttcgccttcacgaagcttccggtgcgcgagtatcccagcgtc
gatccaccggtcgtctcgatcagcaccagctacgagggcgcgtcggccgaggtgatcgag
acccagatcacccaggtgatggagggcgccgtcagcggcgtcgaggggatcaagacgatc
cgctcgaccagccgcgagggatcgtccaacgtccggatcgagttcctgctgacccgcgac
atcgagggggccgccaacgacgtgcgggaccgcgtctcgcgcgcggcccgcagcctgccg
gacgaagccgacgctcccgtcatcgccaaggtggacagcgacagctcgccgatcctgtgg
gcgaccctgaccagcgaacagctcagccggctggagctgaccgactatgcccggcgcgtc
ctggtcgaccagatcaccgccgtcccaggcgtcgccgacgtgcggatcagcggccagcgg
atctacgcgatgcgcgtctggctggaccggagcgcgctcgcggcccgcaatctgaccgtc
caggacgtcgaaacggcactccgacgggagaacgcggagctgccggccggccgaatcgag
tcggcgcagcgggagttcaccgtccgcaccgatacccggctgtcacgggccgagcagttc
tcccgcatcgtcatttcccagcggagcggggacttcatccggctgggcgacgtggcgcgg
gtggagctgggcacccgcgacgaccgcggggactacacggtcaacggccgcgccgccgtc
ggcctgggcgtcaccaagcaggcgaccgccaacacgatggaggtggcggagggcgtcaag
gcgctgctccggcaggtcggcaccaccttgcccggggacgcggccatcgacgtgtcgttc
gacgagagcgtgttcatcgccgaatcgatctaccaggtgttccacgccctgacgatcgcg
ctgggcttggtggtcctggtcacctgggcgttcctccgcgacctgcgcgccacgatcatc
ccggcggtcgccatcccggtgtcgatcatagccgccttcaccgtgctggcggcgctcggc
tattcgatcaacgtgctgaccctgctggcactggtgctcgcgatcgggctggtggtggac
gacgcgatcatcgtggtcgagaatgtcagccgccggatcgagctgggcgagccgccgctg
ctggcggcctatcgcggcgccggccagatcggcttcgcggtgatcgcgaccacggcggtg
ctgatcgcggtgatcttcccgctcgtcctgctgcaggacacggtcggccgcttcttcaag
gagttcgcggtcacgctgggggcgtcggtcgccttctccgcgctggtggccctgacgctg
acgccgatgatgtgctcgcaggtgctgcgcggccaccacggcggggcggtgttccgcctg
accgaacggttcttcgacgggatgacccgggcctattccagggtcctggacggcgtgctg
gccgcacccgtcctgatgctggccctgctcggcgcgctgaccggggccacctggtacctg
ttcaccctggtgccgcaggagttcaccccgccggaggatcgcggcagcttccgcatcacg
gtgaccgcgccggaaggcgccagccaggacttcaccaagcgggaaatggaggcggtcgag
cgcatcctggcgccctaccgggaaagcggcgaagtctccagcgtgctggcgatcctgaac
cccggatggggcggccagaccggcgtgaaccgggcgacgatccaggtccggctggcgccg
tgggaccggcgtgcccggccgcagtcggccctgatggcggagctgcgcggcaagctgcag
gcggtgccgggcgcccgggtcgcggccttcgcgggcggcggcatcgcccgcagcggcgcg
ctcaaccaggtgcaggtcgtcctgggcggcagcagctacgaggaactggcggtctggcgc
gacctgctgatcgaccgcctgcgcgacgagccggggttcggcacgatccaggcgaactac
gacgagaccaagccgcagctccggatcacggtggaccgcgaccgcgcggccgacctgggg
ctcggcacgcgggcgatcggcgaaaccctggagacgctggtcggcgggcggaccgtcacg
cgcttcaccgaccgcggcgaggaatacgacgtggtggtccaggccacgggcagcgaccgc
gccaacccgcgcgacctgtcgaacatcttcctgcgcgccggaacgtcggaacagctggtg
ccgctctccagcgtcgtgaccgtccgggacgtcgccggccccagcgagctgggccgggtc
gaccggctgcgcgcgatcaccgtcacggccaacctggaaggcatcgccatgggcaccgcc
atcgacgtggtgcggaaggcggcggccgaggtgctgcccggccaggtcaggctgaccttc
gacggctcggcgcgggagctgcaggaatcgagcgccgcgatctatttcgcgttcggcatg
gcgctgctgatcgccttcctggtgctggccgcgcagttcgagagcttcacgctgccctcc
atcgtcatgctcacggtgccgctcgccctgttcggcggcctggcggcgatcgtcgccagc
gccatgacgctgaacatctacacccagatcgggctggtgatgctgatcggcctgatcgcc
aagaacgccatcctgatcgtcgaattcgccaaccagatgcgcgacgagggcaaggccatg
gacgcggcgatccgggaggccgccgcgacccggctgcgcccgatcctgatgaccagcatc
gccacggtattcggcgcggtgccgctcgccatggcggaaggtgccggcgcggagagccgg
atggcgatcgggctggtaatcgtcggcggcgtctcggtcgggtcgctgctgtcgctgttc
ggcacgcccctgctctacagcctgctggcgcgccggctccagccgatcggccggatacgc
cgccgcatccaggaactggagctgcagcacgccaagccgacggagggcttgccggcggag
tag
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integrated database retrieval system
