Skermanella mucosa: JL100_031355
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Entry
JL100_031355 CDS
T07652
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
Organism
smuc
Skermanella mucosa
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Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
DUF4407
DUF5666
Motif
Other DBs
NCBI-ProteinID:
UEM24704
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Position
pSM-1:304008..305633
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AA seq
541 aa
AA seq
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MPEARDPEARSRRGKARAQARDAGEKRPAGGAPEPDTPAAGGGVRTGWMTVLRLPRFLRT
EGKPVNRHGPRLLTVTSAPDTPGGDRWGSAEGGRDDGSGDGRHTPWKWWLLAAAILLAGI
GAATLIYLLRSRPEPQPPPPEAPYVETVKARPGRSAITITGSGIVMPRAEVGLSAQVGGR
VDHVHPELVSGGEFDRGEVLVRLEDADYRNQAQRAQATVARRQVELRQAQEEARIARQEY
RLLRDRLGSEGGTAGGAPDVSPLTLGRPQLQAAQAALQAARAELADAELALARTTVEAPF
DGYVRSEDVDVGQFVQPAQELARIYSAGEVEVTVPLLSDKASLIPNLWEMPAGDPGGAGG
GGGRVPALVAIDYGGLRFGWDGYVDRTRAFIDERTRTIDVVVRVPDPRRPGRPIGTDGSE
PLVSPPPLLVGSYATVEIEGRPPERYLTIPASALRRGDSVWALARADQPDRARLRIVEVD
VILRDGDTVQVKADRLPDGVLLVTSTVEAPTDGMLVRTSAEADSAPRDDAPGTGTDTGTA
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggcgagagatcccgaggcgagaagccggcgcggcaaggcgcgcgcccaggcc
cgcgatgccggggagaagcgcccggccggcggcgcgcccgagccggacacgccggccgcc
gggggcggtgtccggaccggctggatgacggtcctgcgccttccccggttcctgcggacc
gagggcaagccggtgaaccggcacggcccccggctgctgaccgtgacctcggcgcccgac
acgcccggcggggatcggtggggatcggcggagggcggccgggacgatggatcgggggac
ggccggcacacgccctggaaatggtggctgctggccgccgcgatcctgctggcgggcatc
ggcgccgcgaccctgatctatctcctgcgctcccggccggagccgcaacccccgccgccc
gaagccccttatgtggagacggtcaaggcgcgccccggccggtcggcgatcaccatcacg
ggcagcggaatcgtgatgccgcgggcggaggtggggctgtccgcccaggtcggcggaagg
gtcgaccatgtccatcccgagctggtcagcggcggcgagttcgatcgcggcgaggtgctg
gtccggctggaggacgccgactaccgcaaccaggcgcagcgggcccaggcgacggtggcc
cggcgccaggtcgagttgcggcaggcccaggaggaggcgcggatcgcccggcaggagtac
cgcctgctgcgcgaccgccttggctccgaaggggggacggcgggcggcgcccccgacgtc
agcccgctgaccctcgggcgcccgcagctccaggccgcgcaggccgcgctccaggccgcc
cgggccgagcttgcggatgccgagctggccctggcccggaccacggtcgaggcgccgttc
gacggctatgtgcggagcgaggacgtggatgtcggccagttcgtccagccggcccaggaa
ctcgcccggatctacagcgccggcgaggtcgaggtgacggtgccgctgctgagcgacaag
gcgtcgctgataccgaacctctgggagatgccggccggagaccctggcggcgctgggggc
ggcggcggacgggtcccggcgctcgtcgccatcgactatggcggccttcggttcggctgg
gacggctatgtggaccgtacgagggccttcatagacgagcggacgcggacgatcgacgtg
gtggtgcgggtgcccgatccgcgccggccgggccggccgatcggtaccgatgggtctgaa
ccgctggtcagcccgccgcccctgctggtcggcagctatgcgacggtcgagatcgagggg
cggccacccgaacggtacctgaccataccggcgtccgctctgcgccgcggcgattccgtc
tgggcgctggcccgtgcggaccagcccgaccgcgccagactcaggatcgtcgaggtcgac
gtgattctccgcgacggcgataccgtccaggtaaaggcggaccggctgcccgacggcgtg
ctgttggtgaccagcaccgtcgaggcgcccacggacggcatgctggtgcgcacgagcgcc
gaagccgactccgcgccccgggacgatgctcccggaaccggaacagataccggaaccgcc
gaatga
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