Streptococcus mutans GS-5 (serotype c): SMUGS5_01970
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Entry
SMUGS5_01970 CDS
T02185
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
smut
Streptococcus mutans GS-5 (serotype c)
Brite
KEGG Orthology (KO) [BR:
smut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smut03019
]
SMUGS5_01970
03009 Ribosome biogenesis [BR:
smut03009
]
SMUGS5_01970
Enzymes [BR:
smut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SMUGS5_01970
Messenger RNA biogenesis [BR:
smut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SMUGS5_01970
Ribosome biogenesis [BR:
smut03009
]
Prokaryotic type
rRNA helicases
SMUGS5_01970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFM80923
LinkDB
All DBs
Position
415226..416575
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AA seq
449 aa
AA seq
DB search
MLFTDFKFKNYINNALANLHFEGPTEVQERLIPLILSGKDLVGESKTGSGKTHTFLLPIF
EKLEEDSLDVQAVITAPSRELARQIYEAAKQIAQFSEQNIRLANYIGGTDKLRQVEKLKA
TQPQIVIGTPGRIYDLVKSGHLDIHKAHTFVVDEADMTLDLGFLDTVDKIAASLPKNIQL
LVFSATIPQKLQPFLKKYLNHPIIEKIKTSTVIADTISNWLISTKGRDKNQQILEIVKSL
KPYLAIIFANTKDRVDDLHAFLSANGFKTAKIHGGIPPRERKRIMNQVKQLDFEYIVATD
LAARGLDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKL
GIVFVPKVLKNGEFQDTYDRDRRLNRKKTQEKLDLEMMGLVKKKKKKIKPGYKKKIQWKV
NEKRRKERRFVKRAQNRANRKAKKQRFDI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttatttacagattttaaatttaaaaattatattaacaatgctttggcaaacttacat
tttgaaggaccgacggaggttcaagaacgcctgattccacttatcttatctggaaaagat
ttggttggtgaatcaaaaacaggatcaggaaagactcatacttttttgttacctattttt
gaaaaattagaagaagattctttagatgttcaagccgttatcactgcaccaagccgtgaa
ctcgccagacaaatttatgaagctgctaaacaaattgctcaattttcagaacaaaatatt
cggcttgctaactatattggcgggactgataaacttcgtcaagttgaaaaactaaaagca
actcagccacaaattgtgattgggacaccgggtcgtatttatgatttagttaaatctggg
catcttgatatccataaagctcatacttttgttgtagatgaagcagatatgactcttgat
ctgggcttcttagatacagttgataaaattgctgcaagtttgcccaaaaatatacagctc
cttgttttttcagcaaccattcctcaaaaattacagccttttttgaaaaaatatctaaat
catcctattatagaaaaaatcaagaccagtacagtcattgcagacaccattagcaattgg
ctgatttcaactaagggacgcgataaaaatcagcaaatattagagattgtaaagagtttg
aaaccctatttggccattatctttgctaataccaaagaccgtgtcgatgatctgcacgct
ttcttgtctgctaatggttttaaaactgcaaaaattcatggaggaattccgccgcgtgaa
cgtaagcggattatgaatcaggttaagcaactagattttgaatacattgtagcgacagat
ttagctgcacgtggcttagatattgaaggcgttagtcatgtgattaatgatgcgattcct
caagatttatcattctttgttcaccgtgttggccgaacaggccgcaatggtctttctggt
acagctatcacgttatatcaacccagtgatgattctgatatcagagaacttgagaagtta
gggatagtctttgttcctaaagtcttaaaaaatggggagtttcaggatacttatgatcgg
gatcggcgcctcaatcgtaagaaaacgcaggaaaaacttgatctggaaatgatgggtctg
gtcaaaaagaaaaagaagaaaatcaaaccgggatacaagaagaaaattcagtggaaagtt
aatgaaaaacgtcgtaaagaacgccgttttgttaaacgtgcccaaaatcgtgctaatcgt
aaagctaaaaaacaacgttttgatatatag
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