Serratia marcescens WW4: SMWW4_v1c44090
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Entry
SMWW4_v1c44090 CDS
T02448
Symbol
uvrA
Name
(GenBank) ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
KO
K03701
excinuclease ABC subunit A
Organism
smw
Serratia marcescens WW4
Pathway
smw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMWW4_v1c44090 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smw03400
]
SMWW4_v1c44090 (uvrA)
DNA repair and recombination proteins [BR:
smw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMWW4_v1c44090 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SMWW4_v1c44090 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
NACHT
nSTAND3
Viral_helicase1
cobW
ScfRs
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AGE20196
LinkDB
All DBs
Position
4766758..4769586
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AA seq
942 aa
AA seq
DB search
MDNIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHHVPLAAQTVSQMVDNVLSQPEGKRLMLLAPVVKDRKGEHTKTLENLAAQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDMAQRLAESFETALELSGGTAVVADMDDE
KADELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQFFDPDRVVQNPEL
SLAGGAIRGWDRRNFYYFQMLRSLAEHYEFDVEAPFNTLSANVQKAVLSGSGKESIEFKY
INDRGDTTVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCHGTRLREEARN
VFVEDTTLPEISDLSIGHAMTFFQNMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGTVDDIMAQPESLTGQFLSGKREIAI
PAQRVQADPTKVLKLSGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPFREVTGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFAGVPE
SRSRGYTPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEVKY
KGKSIHEVLEMTIEEARDFFDAVPALARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVAGTPETVADCEKSHTARFLKPLLNQ
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggacaatatcgaagttcgtggtgctcgaacccataatctgaaaaacatcaacctgatc
atcccgcgtgacaaactgatcgtcgtcaccggcctgtccggttccggcaagtcttctctg
gctttcgatacgctgtatgccgaagggcagcggcgctatgtcgaatcactctctgcctat
gcgcgccagttcctgtcgctgatggaaaaaccggacgtcgatcatatcgaaggcctgtcg
ccggcgatctccatcgagcagaaatccacctcgcacaacccgcgctccacggtcggcacc
attaccgagattcacgactacctgcgcctgctgttcgcccgcgtcggcgagccgcgctgc
ccggatcaccatgtgccgctggcggcgcagaccgtcagccagatggtcgacaacgtgctg
agccagccggaaggcaagcgcctaatgctgctggcgccggtggtgaaagaccgcaagggc
gagcacaccaaaacgctggaaaacctggccgcccagggctatatccgcgcgcgcatcgac
ggcgaagtgtgcgatctgtccgatccgccgaagctggagctgcagaagaaacacaccatc
gaagtggtggtcgatcgcttcaaggtgcgcgacgacatggcgcagcgcctggccgaatcg
ttcgaaaccgcgctggagctgtccggcggcaccgcagtggtggcggatatggacgacgaa
aaagcggacgagctgctgttctccgccaacttcgcctgcccgatctgcggctacagcatg
cgcgagctggaaccgcgcctgttttccttcaacaacccggccggcgcctgcccgacctgc
gacggcctgggcgtgcagcagttcttcgatccggatcgcgtggtgcaaaaccccgagctg
tcgctggccggcggcgcgatccgcggctgggatcgccgcaacttctattacttccagatg
ctgcgctcgctggcggagcactatgagttcgacgtcgaagcgccattcaacaccctgagc
gccaacgtgcagaaggcggtgctgagcggctccggcaaagagtctatcgagttcaaatac
atcaacgatcgcggtgacaccaccgtgcgccgccatccgttcgaaggcgtgctgcacaac
atggagcgccgctataaagagaccgagtccagcgcggtgcgcgaagagctggcgaagttc
atcagcaaccgcccttgcgcctcgtgccacggcactcgcctgcgtgaagaagcgcgcaac
gtgtttgtcgaagacaccacgctgccggagatctccgatctgagcatcggccatgcgatg
accttcttccagaacatgaagctcagcggccagcgcgccaaaatcgccgagaaagtgctg
aaagagatcggcgaccgcctgaaattcctggtgaacgtcggcctgaactacctgtcactg
tctcgctcggcggagacgctctccggcggcgaagcgcagcgaatccgtttggccagccag
atcggcgccggcctggtgggcgtgatgtacgtgctggatgagccgtcgatcggcctgcac
cagcgcgacaacgagcgcctgctggaaacgctgatccacctgcgcaacctcggcaacacg
gtgatcgtggtggagcatgacgaagacgccatccgcgccgccgatcacgtgatcgacatc
ggccccggcgccggcgtacacggcggccaggtggtggcggaaggcaccgtcgacgacatc
atggcgcagccggaatcgctgaccggccagttcctcagcggtaaacgcgagatcgccatc
cccgcgcagcgcgtgcaggccgatccgaccaaggtgctgaagctgagcggcgcgcgcggc
aacaacctgaaagacgtgacgctgacgctgccggtcggtctgtttacctgcatcaccggc
gtgtccggctccggcaaatcgacgctgatcaacgatacgctgttcccgatcgcccagcgc
cagctcaacggcgccaccatcgccgaaccggcgccgttccgcgaagtgaccggcctggaa
catttcgacaaggtgatcgacatcgatcagagcccgatcggccgcacaccgcgctccaac
ccggccacctataccggcatcttcaccccggtgcgcgagctgttcgccggcgtgccggaa
tcgcgcagccgcggttacacgccgggccgcttcagcttcaacgtcaagggcgggcgctgt
gaagcctgccagggcgacggggtgatcaaggtcgagatgcacttcctgccggacatctac
gtgccgtgcgaccagtgcaagggcaagcgttataaccgcgaaacgctggaagtgaagtac
aagggcaagagcatccacgaagtgctggagatgaccatcgaagaagcgcgcgatttcttc
gacgcggtgccggcgctggcgcgcaagctgcagaccctgatggatgtcggcctgtcctac
atccgcctcggccagtcggccaccacgctctccggcggtgaagcgcagcgcgtcaagctg
gcgcgcgaactgtcgaagcgcggcaccggccaaacgctgtatatcctcgacgaaccgacc
accggtctgcacttcgccgatatccagcagctgttggcggtgctgcatcagctgcgcgat
cagggcaacaccatcgtggtcatcgaacataacctggacgtgatcaagaccgccgactgg
atcgtcgatctggggccggaaggcggcagcggcggtggcgagatcctggtcgccggcacg
ccggaaacggtcgccgactgcgagaaatcgcacaccgcacgcttcctgaagccgctgttg
aaccagtaa
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