Sinorhizobium meliloti SM11: SM11_chr0606
Help
Entry
SM11_chr0606 CDS
T01885
Symbol
betA
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
smx
Sinorhizobium meliloti SM11
Pathway
smx00260
Glycine, serine and threonine metabolism
smx01100
Metabolic pathways
Module
smx_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
smx00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SM11_chr0606 (betA)
Enzymes [BR:
smx01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
SM11_chr0606 (betA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
DAO
NAD_binding_8
Pyr_redox_2
Lycopene_cycl
F420_oxidored
Thi4
ApbA
Pyr_redox_3
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AEH77885
UniProt:
F7XAM7
LinkDB
All DBs
Position
complement(640959..642608)
Genome browser
AA seq
549 aa
AA seq
DB search
MQADFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNW
GYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYADVLP
YYKRMEHSHGGEEGWRGTDGPLHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYNGSKQEGF
GLMEQTTWRGRRWSAASAYLRPALKRPNVELIRCFARKIVIENGRATGVEIERGGRIEVV
KANREVIVSASSFNSPKLLMLSGIGPAAHLKEMGIDVKVDRPGVGQNLQDHMEFYFQQVS
TKPVSLYSWLPWFWQGVAGAQWLFFKRGLGISNQFESCAFLRSAPGVKQPDIQYHFLPVA
ISYDGKAAAKSHGFQVHVGYNLSKSRGNVSLRSSDPKADPVIRFNYMSHPEDWEKFRHCV
RLTREIFGQKAFDLYRGPEIQPGEKVQTDEEIDGFLREHLESAYHPCGTCKMGAKDDPMA
VVDPETRVIGVDGLRVADSSIFPHITYGNLNAPSIMTGEKSADHILGRQPLARSNQEPWI
NPRWAVSDR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagatttcgtcatcatcggttccggctcggcgggctccgcgctcgcctatcgc
ctgtcggaagacggcaggaattcggtcatcgtgctcgagttcggcggctcggatgtcggt
ccgttcatccagatgccggcagcgcttgcctggccgatgagcatgaaccgctataattgg
ggctatctctccgaacccgagccgaacctcaacaacaggcgcatcaccgcgccgcgcggc
aaggtgatcggcggctcctcctcgatcaacggcatggtctatgtccgcggccactcggaa
gacttcaaccgctgggaggaactcggcgcacaaggctgggcctatgcggacgtgctgccc
tattacaagcggatggagcattcgcatggcggcgaagagggctggcgcggcaccgacggg
ccgctgcacgtccagcgcggcccggtcaagaatcccctttttcacgccttcatcgaagcg
ggaaaagaggccggcttcgaagtcaccgaggattataacggctcgaagcaggagggcttc
gggctgatggagcagacgacatggcggggccgccgctggtcggccgcttccgcctatctg
aggccggcgctcaaacgtccgaatgtcgagctcatccgttgcttcgcccgcaagatcgtc
atcgagaacggccgggcgacgggcgtggagatcgagcggggcggacggatcgaggtggtg
aaggccaatcgcgaagtgatcgtctccgcctcttcgttcaattcgccgaagctgctgatg
ctgtccggcatcggcccggctgcgcacctcaaggagatgggaattgacgtaaaggtcgac
cggcccggcgtcggccagaacctgcaggaccacatggaattctatttccagcaggtgagc
acgaagccggtttcactctattcctggctgccatggttctggcagggcgtcgccggtgcg
caatggctcttcttcaaaagaggcctcggcatttccaaccagttcgagtcctgcgccttc
ctgcgctcggcacccggcgtgaagcagccggacatccaataccacttcctgccggtggcg
atcagctatgacggcaaggcggcggcgaagtcgcacggcttccaggtgcatgtcggctac
aacctctccaagtcgcgcggcaacgtctcgctccgctcctccgacccgaaggccgacccg
gtgatccgcttcaactatatgagccatccggaggactgggagaagttccgccactgcgtg
cggctcacgcgcgagattttcgggcagaaggctttcgacctctatcgcggccccgaaatc
cagcccggcgaaaaggtgcagacggacgaggagatcgacgggttcctgcgcgagcatctc
gaaagcgcctatcatccctgcggcacctgcaagatgggtgcgaaggacgacccgatggcc
gtggtcgacccggaaacccgggttatcggcgtcgacgggcttcgtgtcgccgactcctcg
atcttcccgcacatcacctatggcaacctgaacgccccctcgatcatgaccggcgagaag
tccgccgatcatatcctcggcagacagccgctcgcccgctcgaaccaggagccgtggatc
aatccgcgctgggcggtgagcgacaggtaa
DBGET
integrated database retrieval system
