Stenotrophomonas maltophilia D457: SMD_0022
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Entry
SMD_0022 CDS
T02061
Symbol
ku
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
smz
Stenotrophomonas maltophilia D457
Pathway
smz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SMD_0022 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smz03400
]
SMD_0022 (ku)
DNA repair and recombination proteins [BR:
smz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SMD_0022 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Pol_alpha_B_N
eIF3_N
Motif
Other DBs
NCBI-ProteinID:
CCH10625
LinkDB
All DBs
Position
25913..26833
Genome browser
AA seq
306 aa
AA seq
DB search
MARPIWTGTLSFGLLNVPVSLMSGERKVDLQFRMLDSRDRKPIRFERVNADTGEEVPWKD
IVKAYEYDKGSYVVLEEGDIRSAAPESHEAVEVESFVDAAQIDPRYYEKPYLLVPGKKAE
KGYVLLRETLRSTGKVGIARVVVRTREYLCAVMPHADALVLMILRYPQELVDPEDYKLPA
GKLSDYRITSKETAMAEQLIESMSGDWDPSHYHDEFRERLQQVLNKRIKSKGGTTRVEDE
PAPHEDATTNVVDFMALLQKSLDANKRTPAKKAATRKAAAKSTVKKAAKTTTKKAAKKAA
PRRKAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccgatctggaccggtacgctgtccttcggactgctcaatgtgccggtgtcg
ctgatgtccggcgaacgcaaggttgacctgcagttccgcatgctcgactcgcgcgatcgc
aagccgatccgtttcgaaagggtcaacgccgacaccggcgaggaagtgccctggaaggac
atcgtcaaagcctatgagtacgacaagggcagttatgtcgtgctggaggaaggcgacatc
cgctcggcggcgccggaaagccacgaagcggtggaggtggaatccttcgtggacgcagcg
cagatcgacccgcgctactacgagaagccgtacctgctggtgcccggcaagaaggccgaa
aagggctacgtgctcctgcgcgaaacgctgcgcagtaccggcaaggtaggcattgcccgg
gtggtggtgcgcacgcgcgagtacctgtgtgcggtgatgccgcatgcggacgcgctggtg
ctgatgatcctgcgctatccgcaggaactggtggatcccgaggactacaagctgcctgcc
ggcaagctgtccgactaccgcatcaccagcaaggaaacggcgatggccgagcagttgatc
gagtcgatgtccggcgattgggacccatcgcactaccacgatgaattccgcgagcgcctg
cagcaggtgctgaacaagcgcatcaagtccaagggcggcaccacgcgggtggaagatgag
cccgcaccacacgaggatgcgacaacgaacgttgtcgacttcatggcattgctgcagaag
agcctggatgcgaacaagcgcacgccggcgaagaaggccgcaacgcgcaaggcagccgca
aagtcgacggtgaagaaggccgcaaagacgacaacgaagaaggctgcgaagaaggccgca
ccacggcgcaaggcaggttga
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