Stenotrophomonas maltophilia D457: SMD_1209
Help
Entry
SMD_1209 CDS
T02061
Name
(GenBank) wall associated protein
Organism
smz
Stenotrophomonas maltophilia D457
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
ChitinaseA_N
DUF6443
Y_Y_Y
Motif
Other DBs
NCBI-ProteinID:
CCH11773
LinkDB
All DBs
Position
1339547..1344934
Genome browser
AA seq
1795 aa
AA seq
DB search
MRIWQWQALLGAALAMSSGWTWASSPVTPHTEYYKKIKNGEGLAPLTSSLFGDSISPSSG
STEFVVTDIDLPGNNALPVRLQRRLAVQSFKDRQPLGGFGSWDIEVAYMHATFDSIWKWN
ESGNGATQRCSQTFYPKTRTGVGTFEIWTGVQVRVPDQGEQEMLLIANASNPKPTNGETY
RWGTRGNMRLSCLGSTANGYPGEGFLGVDASGNRYFFNVGIERTAGFMELGQGMGSKLVR
VLLMASRVEDRHGNWVAYDYSGDKLVGIRGSDGRAISIAYAGDRIASAAANGRTWSYEYN
EGSGGMGFARWPALRAVQQPDGARLGYEYSWQDGGFGGLNPEYQSWDGEPKLCTKPTFEQ
SGFSLIATHPSGTRGQFEFKYLRRTRLGVKSTACADMGGGRYAQRASNAFDLFAITSKTL
TGPGLGNLTWTYESGGYDSGLPNSAVSTIVEPDGTRRHSVFGRKLDENEGQLLQEAVRAP
DGQIVQVTTNTYMSSDEVQAGPFPDSYGSMTAADDPFAVKIRPLKQSVLSQDGVNFVNTT
DQFDAHVRPVVQTESNSLGRSRTLRTTYFDDTGRWILGQVGRSTQSVGGVEIETERTEFD
SMARPQRTYAFGVLQQTLGYHADGTLASVADGKGNTIALGSWKRGLPQSVAYPDGSSASL
QVDDNGWVRAAVEPNGASRSFDYDGMGRIVLATQAANDSVAWNPSTTQFFQVPGAEIGLE
AGHWKRESSTGNARAVTYYDGLWRPVLEESFDAADRGGTLRQTVTRYDSNGRPVFTSYPT
RTASDFRSALPGTYTGYDALGRPNRSEQDSELGRLVTTTEQLGGGSVKVTNPRGIATTTD
YLMYGKPSQDTPIRILHAEGVVTEIQRDTLGKPLSILRRNYDGSVSVRRQYVYDGAQRLC
KSMEPETGATGMGYDAAGNLLWSASGLTLLGPQCESEAAYASPSRADRTYDSMNRLLTLR
FSDGQGDQDWNYWPGGKVKRVQTRNNGAITTNDYTYNLRGLPTSESVAYDGGEAWALGYG
YDANGALATHVQPSGLTIDYGPNALGQPTRAGAFAINVRYYANGGMSGFTYGNGVVHQMT
QNARGLPDRSTDSGAGGKVIDDGYDYDANGNVAAISDGLPAAPGNRDMRYDGLDRLTTVT
AASFGNASYAYNVLDNIVTANVGARRQSFEYDFNNRLTNVRDVGSGATVTGLGYDSQGNL
KIRNGVVFRFDYGNRLREVDGKEAYQYDAHGRRTLASATNGNIRSLYGQDGVLRYQHDQR
QAKGFDYIQLNGSLVAKRAVDIAPAALVVTVPGYSADGAFAVQWTAVAGAQRYEVQESSG
GDWQAVYQGPALNVSLAGRSSGVYRYRGRACNGTVCGAWGVEASIQVELAPTAAPVITAP
AQGINGTYSLSWSAVQGAARFVLEEAVGGGWNVAFDGSGRTYQVTSKPAGTYRYRVKACN
PQGCGAYSAEAAITALYAPSVPALSVPAASYNGSYAVSVSSVAQASSYRIEEQFNGGAWT
EINRISGNQLVISGRIAGSYAYRAFACNDAGCSASSAVGAIVVTLPPVQATGINLGGVSY
SSTVSMWWGAIPAATSYQLMEQLNGGGFGLAQEDGATAVARGGRWPGQWDYQVRGCNVAG
CGPWSAVAGVRVIGPPATPVLRVPDGVGIGAAYSISLLEVADATRYEIDESTDGANWSLI
AGDRTVSLNKGGGGNFYYRGRACNPAGCSPSSAAGLVAISSAPAVPTGVRIVKSGPNICS
VIWNASPGATYYNMRSSSGGATYRAEGIGYDLDTRCQGGYKVRACNAQACSAWSN
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatctggcagtggcaggcgttgttgggcgcggcattggccatgtcatccgggtgg
acctgggcgagtagcccggtcaccccgcataccgagtactacaaaaagatcaagaacggc
gaggggctggcaccgctgacctcgagcctgttcggggatagcatcagccccagctcgggg
tcgaccgaatttgtcgttaccgacatcgacctgccaggcaacaacgcgctgccggtgcga
ttgcagcgtcgcctcgctgtgcagtccttcaaggaccggcagccgttggggggattcggc
agctgggacatcgaagtcgcctacatgcacgccaccttcgactccatctggaagtggaac
gagtcgggtaatggcgccacccagcgttgctcgcagaccttctaccccaagacgcgtacc
ggcgtgggcaccttcgagatttggaccggcgtgcaggtgcgtgtccccgaccagggcgag
caggagatgctgctgatcgccaacgcctccaacccgaaacccaccaacggtgaaacctat
cgctggggtactcggggcaacatgcgcctcagttgcctgggctcgacggccaatggctat
cccggcgaaggattcctgggcgtggatgcatcggggaatcgctacttcttcaatgtgggg
attgaacgaacggctggcttcatggagctgggccaaggcatggggtccaagctggtgcgt
gttctgctgatggccagccgggtcgaagatcgccacggcaactgggtagcctatgactat
tcgggcgacaagctggttggcattcgcggcagtgatggtcgcgccatctccattgcctat
gccggggaccgcattgccagtgcggcagccaatggccgtacctggagctacgagtacaac
gaaggttccggtgggatgggatttgcacgctggcccgcgctgcgcgccgtccagcagcct
gatggcgcgcgcttgggctacgaatacagctggcaggacggtgggttcggtggcctgaat
ccggaatatcagagctgggatggcgaaccgaagctctgcaccaagcccacgttcgagcag
tctggattcagcctgatcgcgacccacccatctggaacgcgtggacagtttgagttcaag
tacctgcgccgcacccggctgggtgtaaaaagtaccgcttgcgcagacatgggcggtggg
cgctacgcgcaacgcgcctccaatgcgttcgacctcttcgcgatcaccagcaagacgctg
acggggccgggcttgggcaacctgacctggacctacgagtcgggtgggtatgactcgggt
ctaccgaattccgcggtgtcgacgatcgtggaaccggatggtacgcgccgtcacagtgtg
ttcggacgaaaactcgatgagaacgaggggcagttgttgcaggaggcagtgcgtgctccg
gacggtcagatcgtccaggtcaccaccaatacctatatgagttcggacgaggtccaggcc
ggaccgttcccggacagctacggttcgatgaccgcagccgatgatcccttcgccgtcaag
attcgtcccctgaagcaatctgtgctcagccaggatggcgtcaacttcgtcaacacgacc
gatcagttcgacgcgcatgtgcggccggtggtgcagaccgagagtaactcgttgggacgc
tcgcggacgctgagaaccacctacttcgacgacaccggccgctggatactcggccaggtc
gggcgcagcacacagagcgttggcggcgttgagatcgagaccgagcgcaccgagttcgac
tcgatggcgcgcccgcaacgtacctacgccttcggcgtgctgcagcagacgctgggctat
cacgccgatggcacgctcgcctccgtggccgatggcaagggcaataccattgcgctgggc
agctggaagcgtggcctgccgcagagtgttgcgtacccggacggcagcagtgcctcgctg
caggtcgatgacaatggctgggtgcgcgcggcagtggagcccaatggtgccagccggagt
ttcgactacgacgggatgggccggatcgtactggcgacccaggccgccaatgacagcgtg
gcctggaatccttctacaacgcaattcttccaggtgccgggcgcggagatcgggctggaa
gcaggccattggaagcgcgagtccagtaccggcaacgcacgcgcggtgacgtactacgac
gggttgtggcgcccagtattggaagagtcgttcgacgctgcggaccgtggcggtacattg
cgccagacggtgacccgctatgacagcaatgggcgcccggttttcacctcctatccgacg
cgcacggcgtccgacttccgctcggcgctgcccggcacctataccggctatgacgcactc
gggcgccccaatcgcagcgagcaggacagcgaactggggcggcttgtcacgaccaccgag
caacttggcggaggcagcgtaaaggtgaccaatccgcgcggcattgccaccaccaccgac
tacctgatgtacggcaagcccagccaggacacgcccatccggattctccacgctgaggga
gtggtgacggagattcagcgcgacacgctgggcaagccgctgtcgatcctgcggcgcaac
tacgatggcagcgtcagtgtgcggcggcagtatgtctatgacggcgcccagcgcctgtgc
aagagcatggagcctgagaccggtgcaaccggcatgggctacgacgccgcaggcaatctg
ctctggtctgcctcgggcctgacgttgctgggccctcaatgtgagagcgaggctgcctat
gcgtcgccttcgcgggctgaccggacctacgacagtatgaatcgcttgctgacgctgcgc
ttctcggatggccagggtgatcaggactggaactattggcctggcgggaaagtgaagcgt
gtgcagacccgcaacaacggcgccatcaccaccaacgactacacctacaacctgcgtgga
ctgcccacgtccgagagcgtggcctacgacggtggcgaggcctgggcgctgggctatggc
tacgatgcaaacggcgccttggcaacccatgtgcagccgtccggcctgacgatcgactac
ggcccgaatgcgctggggcagccgacgcgagccggagccttcgccatcaacgtgcgctat
tacgcgaacggcggcatgagcggcttcacctatggcaacggcgtcgtgcatcagatgacg
cagaacgcgcgcggcctgcctgatcgcagcaccgacagtggtgcaggtggcaaggtcatc
gatgacggctacgactacgatgccaatggcaatgtggcggccatcagtgacggcctgccg
gcagcccctggaaaccgcgacatgcgttacgacggcctggatcgtctgaccacggtgacg
gcggccagcttcggaaacgcaagctatgcgtacaacgttctggacaatatcgtcaccgcc
aacgtcggcgcacgacggcagtcctttgagtacgacttcaacaatcggttgacgaacgtg
cgggatgtcggcagtggtgcgaccgtcaccgggcttggctatgacagccagggtaacctg
aagatccgcaatggcgtcgtgttccggttcgactacggcaatcgcctgcgcgaggtcgat
ggcaaggaggcttatcagtacgatgcacatggccgtcgtaccttggccagcgcaaccaat
ggcaacattcgttccctctatgggcaggatggcgtgctgcgctatcagcacgaccagcgc
caggccaagggctttgactacatccagctcaacggcagcctcgttgccaagcgtgccgtg
gatatcgcgcctgcagcattggtcgtaacggttccgggttacagcgcggacggtgcgttt
gcggtgcagtggacagccgttgccggtgcgcagcgttacgaggtgcaggagtcgagtggc
ggtgactggcaggctgtctatcaagggcctgcgctgaacgtttcgctggccgggcgaagc
tccggcgtctatcgctatcgtggccgtgcctgcaatggcactgtctgcggcgcttggggt
gtggaagcctccatccaggtggagcttgctcccaccgctgcgccggtgatcactgcaccg
gcgcaaggtatcaacggaacctattccctgagctggtcagcggtgcagggggccgcccgc
tttgtgcttgaggaggccgtgggtggtggttggaatgtggcctttgatggctctggccga
acctatcaagtgaccagcaagcctgcaggcacctatcgctatcgggtcaaagcatgcaat
ccacagggctgcggcgcctactcggccgaagcggcgattaccgcgctgtatgccccatcc
gtacccgcactgtcggtacccgctgcgagctacaacggcagctacgccgtctctgtttcg
agcgtggcccaggccagcagctatcgcattgaagaacagttcaacgggggggcatggact
gagatcaaccggatcagtgggaatcaactggtcattagtggacgaatcgccggcagttac
gcctatcgtgcctttgcatgcaatgacgccgggtgcagcgcgtcaagcgccgtaggcgcg
atcgtcgtgacattgccaccggtccaagccacgggaatcaatctcggcggtgtgagctac
agttcaaccgtgagcatgtggtggggcgcaatccccgcagcgacgagctaccagctgatg
gaacagctcaatggcgggggcttcggactcgcccaggaagacggcgcgaccgccgtggcc
cgaggcggtcgctggccggggcagtgggactaccaggtgcgtggctgcaatgtcgccggt
tgcggaccgtggtcagcggtagcgggcgtgcgcgtgattggtcctccggcgaccccggtc
ctgcgcgtgccggatggggtgggaatcggcgcggcttactcgatctccctgctggaagtg
gcggacgcgacgcgctatgaaatcgacgaaagtactgacggcgccaactggtcgctgatt
gcgggggatcgaaccgtttccctgaataagggcggcggaggcaacttctactaccgtggt
cgtgcctgcaatcccgcaggctgcagccccagttctgctgctggcctggttgcgatttcc
agtgcgccggccgtacctacgggtgtgaggatcgtaaagagcggccccaacatctgctcg
gtcatctggaatgcgtcgccgggtgccacctactacaacatgcgttcaagcagcggcggc
gcgacctatagggcagaaggcatcggctacgacctcgatacgcgctgccagggtggttac
aaggtgcgtgcctgcaatgcgcaggcgtgctcggcctggtcgaactga
DBGET
integrated database retrieval system
