Stenotrophomonas maltophilia D457: SMD_2960
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Entry
SMD_2960 CDS
T02061
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
smz
Stenotrophomonas maltophilia D457
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smz03016
]
SMD_2960 (truB)
Enzymes [BR:
smz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SMD_2960 (truB)
Transfer RNA biogenesis [BR:
smz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMD_2960 (truB)
Prokaryotic type
SMD_2960 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
CCH13484
LinkDB
All DBs
Position
complement(3276202..3277110)
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AA seq
302 aa
AA seq
DB search
MTRIQFRRLDGILLLDKSTGMSSNAALQVARRLFRAEKGGHTGSLDPLATGLLPLCFGEA
TKIAGLLLGSAKAYDAEIVLGQTTDTDDAEGQVLLQRPVPAISAQALQAALAPLTGTIRQ
RAPIYSALKQGGEPLYVKARRGDVIEAPEREVQVHAIEVLEQQPERLRLRVTCGSGTYIR
SLARDLGERLGCGAHISALRRLWVEPFREPAMVTLDQLRAMVEAGDEAGMDALLLPLAAG
LAEYPRVDLDADQAHRFCVGQRQRDLSWPRGLVAVFGPDDAVQGLGQVDESGLLAPQRRF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattcagttccgtcgcctggatggcatcctgctgctcgacaagtcgaccggc
atgagctccaacgccgccctgcaggtggcgcgccgcctgttccgcgccgagaaggggggg
cataccggcagcctcgacccgctggccaccggcctgctgccgctgtgtttcggcgaggcg
accaagatcgctggcctgctgctgggttcggccaaggcctacgacgccgagatcgtgctc
ggccagaccaccgataccgacgacgccgaaggccaggtgctgctgcagcgcccggtgccg
gcgatcagtgcccaggccctgcaggctgcgctggcgccgctgaccggcaccatccgccag
cgtgccccgatctattcggcgctgaagcagggcggtgaaccgctgtatgtgaaggcccgc
cgcggtgacgtcatcgaagcgcccgagcgcgaggtgcaggtacacgccatcgaggtgctg
gagcagcagccggaacggctgcggctgcgcgtgacctgtggttccggcacctatatccgc
agcctggcccgcgacctcggcgaacgcctgggctgtggcgcccacatcagcgcgctgcgc
cggctctgggtcgagccgttccgcgagcctgccatggtcaccctggaccagctgcgggcg
atggtcgaggccggtgacgaggctggcatggacgcgttgctgctgccgctggcggccggc
ctggctgaatacccgagggtcgacctggacgccgaccaggcccaccggttctgcgtgggc
cagcgccagcgcgacctgtcctggccgcgcggcctggtggccgtgttcggtccggacgat
gctgtccagggcctgggccaggtcgacgagagtggcctgctggccccgcagcgccgtttc
aacctctga
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