Stenotrophomonas maltophilia D457: SMD_4151
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Entry
SMD_4151 CDS
T02061
Symbol
xthA3
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smz
Stenotrophomonas maltophilia D457
Pathway
smz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMD_4151 (xthA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smz03400
]
SMD_4151 (xthA3)
Enzymes [BR:
smz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SMD_4151 (xthA3)
DNA repair and recombination proteins [BR:
smz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SMD_4151 (xthA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CCH14656
LinkDB
All DBs
Position
complement(4657836..4658603)
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AA seq
255 aa
AA seq
DB search
MKIASWNVNSLNVRLPHLEQWLKDFGPDIVGIQETKLEDHKFPDSALIAAGYRSVFAGQK
TYNGVALLSREPAQDVQIGIPGFEDEQKRVIAGTFGDLRVINLYVVNGQDIGTDKYDYKL
RWLEAVHAWIAGELQRHPKLIVMGDFNIAPDARDVHDPAVWNDNHILTSTAERGALNKLL
QLGLHDGFRLHNDEAGTFSWWDYRAAGFRRNLGLRIDLTLVSEALKGSAVASGIDREPRT
WERPSDHAPAWVQIG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcctcgtggaacgtcaattcgctcaatgtccgcctgccgcacctggagcag
tggctcaaggacttcggcccggacatcgtcggcatccaggaaaccaagctggaggaccac
aagttccccgattcggcgctgatcgccgcgggctaccgcagcgtgttcgccggccagaag
acctacaacggcgtggcgctgctgtcgcgtgagccggcgcaggacgtgcagatcggcatt
cccggtttcgaggacgagcagaagcgcgtcatcgccggcaccttcggcgacctgcgggtg
atcaacctgtacgtggtcaacggccaggacatcggtaccgacaagtacgactacaagctg
cgctggctggaagcggtgcatgcctggatcgccggagaactgcagcgccacccgaagctg
atcgtgatgggcgacttcaacatcgccccggacgcgcgcgacgtgcacgacccggcggtg
tggaacgacaaccacatcctgacctccaccgccgagcgcggcgcattgaacaagctgctg
cagctgggcctgcacgatggcttccgcctgcacaacgacgaggcgggtaccttcagctgg
tgggactaccgtgccgccggcttccgccgcaacctgggcctgcgcatcgacctgaccctg
gtctcagaggcgctgaagggcagtgcggtggcctcgggcatcgaccgcgagccgcgcacc
tgggaacgcccgagtgaccatgcgccggcctgggtgcagatcggttga
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