Spongiibacter nanhainus: I6N98_00355
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Entry
I6N98_00355 CDS
T07977
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
snan
Spongiibacter nanhainus
Pathway
snan01501
beta-Lactam resistance
snan01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6N98_00355
01503 Cationic antimicrobial peptide (CAMP) resistance
I6N98_00355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snan02000
]
I6N98_00355
01504 Antimicrobial resistance genes [BR:
snan01504
]
I6N98_00355
Transporters [BR:
snan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
I6N98_00355
Antimicrobial resistance genes [BR:
snan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6N98_00355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
flgE_D3
Motif
Other DBs
NCBI-ProteinID:
QQD18366
UniProt:
A0A7T4UQ71
LinkDB
All DBs
Position
complement(66618..69647)
Genome browser
AA seq
1009 aa
AA seq
DB search
MRFTDLFIRRPLLAWVLNALILLFGVVAFSYMELRPYPDVENAQIIINTSYPGASADVVQ
GFVTGPMQRAIVAAEGIDYYYSRTQDGLSTINVRVDTRFDADDVVTDIVGKIASVRGEMP
ENVMEPVVTKFAGGLAPVWIRMQDSEMSAEQITEFFYRVVRPALFNVEGAAGLMPIGQRP
FAMRLWLDPVRMAAMDVTAAEVQHAVQSNNYISEAGEIRNTMVVQPIRAATDINTASEFA
DIVIREKDGALVRLRDVATVELGAEPLRQKGFVNGEPSLLAGIDMAPDSNPLELSHNVRE
AVDTLQSQLPPTMRLEVFFDLGKFVADSLREVSMTLLEALVIVGVIALLFFGNPRAVLIM
MISIPVSLVGTFLIMWSLGYSLNLFTLLALVIAIGLVVDDTIVVVENIHRYIEQGQPPME
AALVGAKEVIAPVIAMSLTLVAVFLPVGFIEGLSGQLIREFVFTLAGSVVISGVVALTLS
PMLSSRILKTEEDNSIAHWLDERFDRLRQGYANKLHGALKYRPVWLMTAIVVTAAIPFLF
NLSEKELVPLEDTGNLHIAYTAPAHMSEEYVTRHGDMIEELFKELPGVANTLRFELMMED
GTSLAVAEFKPWSERDFNVLDLQRPFQQKLDTLTGVRANAFILDISPAAGGANLPIQMAI
RTTEDFRELSQVSERFLEEIRASGNFMFVDSDLKYTKPEIKVDIDRDKAGELGISMADIG
STLSAMMGEGYINRFSYEGESYKVIPQASVDKRFDQSWLERYYVRTRSGDSIPLGAIVET
EVTSKPSGRLQFEGMNAATLSMIMFPDVSMDEAIDYLNTTAERILPQGYGIDYGGKSRTH
LQEGNTLLIAFILALVTIYLFLVAQYESLRDPLVVLITVPMSISGALLFLSVDIVTLSLF
SQVGLITLVGLISKHGILVVDFARRLQEQGVAFEEAIIEAASIRLRPILMTTAAIVVAVL
PLLMASGPGAESRHHIGLVIAAGMVIGTLFTLFVLPVMYTYIAKRRQPS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttaccgatctgtttattcgccggcccttgctggcctgggtactgaatgcactg
attctgctgtttggggtagtggcgttcagctatatggagctgcgcccctatccggacgtt
gaaaacgcccagatcattatcaatacctcctaccccggcgcctcggcggatgtggtgcag
ggctttgtcaccggccccatgcaacgcgccatcgtcgcggccgagggcatcgattactac
tactcccgcacccaggacggtttgtccaccatcaatgtgcgggtcgacacccgctttgac
gccgacgatgtggtcaccgacattgtcggcaagatcgcctcggtgaggggcgagatgccg
gaaaacgtaatggagccggtggtcaccaaattcgccggcggcctggcaccggtatggata
cggatgcaggactcggagatgtcggccgagcaaatcaccgagttcttctaccgggtggtg
cgtccggcgctgtttaatgtggagggtgccgccggcttgatgcccattggccagcgcccc
tttgccatgcgcctgtggctggacccggtgcggatggcggccatggatgtgaccgccgcc
gaagtacagcacgcggtgcaaagcaataactacatcagtgaggcgggggagattcgcaac
accatggtggtgcaacccatccgcgccgcaaccgacatcaataccgccagcgaatttgcc
gatattgtgatccgcgagaaagacggcgcactggtaaggctgcgggacgttgccactgtt
gagctgggtgcggaaccgctgcgccagaagggctttgtcaacggcgaacccagtctgctg
gcgggcatcgatatggcgccggactccaaccctctggagctaagtcacaatgtgcgggaa
gccgtagataccctgcaaagtcagctgccccctaccatgcgtcttgaagtgttctttgac
ctgggtaagtttgttgccgattccttgagagaagtcagcatgaccctgctggaggcgctg
gtgatcgtcggtgtgatcgccctgctgttttttggcaacccccgggcggtgctgattatg
atgatcagtattccggtatcgctggtgggcaccttcttgatcatgtggtcactgggctac
agcctcaatctgtttaccctgttggcattggtcatcgccatcggtctggtggtggacgac
accattgtggtggtagagaacatccaccgctatatcgagcaggggcagccgcccatggag
gcggcactggtgggcgccaaagaagtgatcgctccggttatagccatgagtctgactctg
gtggcagtgtttttgccggtgggctttatcgagggcttgagtggccagctgatccgcgaa
tttgtcttcaccctggccggctcggtggtgatctccggggtggtggcactgaccctgtcg
ccaatgctgtcctcccggatactcaaaaccgaggaagacaactccattgcccactggctg
gacgagcgctttgatcgcctacgccagggctacgccaacaaactgcacggcgcattaaag
taccggccggtatggctgatgaccgccattgtggtgacggcggctattccctttttgttc
aacctctccgagaaggagctggtgccactggaagataccggcaacctacacattgcctac
accgccccagcccatatgagcgaggaatatgtgactcgccacggcgatatgatcgaggag
ctgtttaaagagctgcccggcgttgccaacaccctgcgctttgaattgatgatggaagac
ggcacctcgctggcggtggcggaattcaagccctggagcgagcgggactttaacgtgctg
gatttgcagcgccccttccagcagaagctcgacaccctgactggggtgcgggccaacgcc
tttattctggatatctccccggctgcaggcggcgccaacctgcccattcaaatggccatt
agaaccaccgaagatttccgggagctgtcccaggtcagcgaacgctttctggaagaaatc
cgcgccagcggcaactttatgtttgtcgacagcgacctgaagtacaccaagccagaaatc
aaggtggatattgatcgggacaaggccggcgagctgggcatcagcatggcggacatcggc
tccaccctgtcggcaatgatgggtgaaggctatatcaaccgttttagctacgaaggggaa
agctacaaagtcattccccaagccagcgtcgacaagcgttttgatcagtcctggctggag
cgctactacgtgcgtacccgcagcggcgacagcattccgctgggcgccatcgttgaaacc
gaagtcaccagcaagcccagtggtcgcctgcaatttgaaggcatgaacgccgccactctg
tcgatgatcatgttccccgatgtttccatggacgaggccatcgactacctcaacactact
gcagagcgcatccttccccagggttacggtatcgattacggcggcaaatcccgcacccac
ctgcaggagggcaacaccctgctgatcgcctttattctggcactggtgaccatctacctg
ttcctggtggcccagtacgaaagtctgcgggacccactggtggtattgattaccgtaccg
atgtcgatcagcggcgcgctgctgttcctcagtgtagatatcgtcaccctgagcttgttt
agccaggtcggcttaatcaccctggtaggcttgattagcaagcacggtatcttggtggtg
gattttgcccggcgcctgcaagaacagggtgttgcctttgaagaggccattatcgaggcc
gcctcaatccgcctgcggcccatattgatgaccaccgccgccatcgtggtagcggtactg
ccgctattgatggcctccggccccggcgccgaaagccgccatcatattggcctggtgatt
gctgccggcatggtcatcggtacgttgtttaccttgttcgtgctaccggtgatgtacacc
tatattgccaagcggcggcagcctagctag
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