Spongiibacter nanhainus: I6N98_06220
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Entry
I6N98_06220 CDS
T07977
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
snan
Spongiibacter nanhainus
Pathway
snan00521
Streptomycin biosynthesis
snan00523
Polyketide sugar unit biosynthesis
snan00541
O-Antigen nucleotide sugar biosynthesis
snan01100
Metabolic pathways
snan01110
Biosynthesis of secondary metabolites
snan01250
Biosynthesis of nucleotide sugars
Module
snan_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
I6N98_06220 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
I6N98_06220 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
I6N98_06220 (rfbC)
Enzymes [BR:
snan01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
I6N98_06220 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF6682
Motif
Other DBs
NCBI-ProteinID:
QQD19442
UniProt:
A0A7T4R349
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Position
1366449..1366988
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AA seq
179 aa
AA seq
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MNVIETKLKDCLIIEPKVFGDERGFFLETFQADRYREQAGITLPFVQDNHSRSSKGVLRG
LHFQKSKPQGKLVRVVSGEVYDVAVDIRQDSPSFGQWESVILSEENKRQFWVPPGFAHGF
VVLSDTADFEYKCTDYYDPRDEGSLIWNDPAMAISWPLSDPTLSDKDSKAPTFAELFKS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcattgagacaaagttaaaggattgcttgattatcgagccgaaggtatttggc
gatgaacgggggttctttctagaaactttccaggcggatcgatatcgcgagcaggcgggg
attacactcccatttgtccaggataatcattctcggtcctctaaaggcgtattgcggggt
ctccattttcagaaaagtaaaccccagggcaagctggtgcgagttgtgagcggtgaggtt
tatgatgttgcggtggatattcgtcaagactctccaagttttgggcagtgggagagtgtg
atcctctcggaagaaaacaaacggcaattctgggtgccaccaggctttgcccatggcttt
gtggtacttagcgataccgctgactttgaatacaagtgcaccgactattacgacccacgt
gacgagggtagcttgatatggaatgatcctgccatggcgattagctggccattaagtgat
cctactttatccgacaaagacagcaaggcgcccactttcgcagagttattcaaatcatga
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