Spongiibacter nanhainus: I6N98_08840
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Entry
I6N98_08840 CDS
T07977
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
snan
Spongiibacter nanhainus
Brite
KEGG Orthology (KO) [BR:
snan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snan01011
]
I6N98_08840
Enzymes [BR:
snan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
I6N98_08840
Peptidoglycan biosynthesis and degradation proteins [BR:
snan01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
I6N98_08840
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Paralog
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GFIT
Motif
Pfam:
LysM
SLT
OapA
Motif
Other DBs
NCBI-ProteinID:
QQD19921
UniProt:
A0A7T4R3T0
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All DBs
Position
complement(1937166..1938749)
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AA seq
527 aa
AA seq
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MIKANLYTPLRCALLFTVTTLVACAQSPSAPAQYAAKKSCSKATRCVQEERVVGAALDRD
FVQTRPAKQAAPGFNSLWERIGTQLQFDELGSHEAVEDMEDWYASHNYYLTKISQRAIPY
MHYILHAVEQRDMPIDLALLPFVESAFDPFAYSHGRAAGLWQFVPNTAEHMNIPIDWWYD
GRRDVIVSTNAALDYLQELNARFDGDWLLTLAAYNAGGGRVNRAITHNRKAGRPTDFWSL
RLPRETKRYIPKLLALVKVFRNPASYNITLPDAPDEPYFALVKTGGQLSLSQAAKLADTT
VDELYKLNPALNRSTTAPNGPHNLLVPVAKAKRFNHQLAKLSPDQRRVIGGIYTVKPGDT
LISIARKHHIDLATLRATNKLKGDFLKAGQTLSIPMGEQQSDALNRGVAAADREKRLYTV
RRGDNLSKIANQFDVSTRDLLRWNRLSARDIIHPGDQLTVWINSASGRDMTRKVGYTVRN
GDSLWAIARRFKVDVADILEWNSITSRNHLRPGQSLTLFVDITTADL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagccaacttgtatacgccactgcggtgcgccttgctctttacagtcacaacc
cttgtggcctgtgcgcaatcaccatcggctcctgcccaatacgcggccaaaaagagttgt
tcaaaagcgacccgctgtgttcaagaagagcgtgtcgttggcgctgcattagaccgggac
tttgtccaaacccgccccgcaaagcaagccgcgcccggctttaactcactctgggagcgt
attggtacccagttgcagtttgatgagctgggaagccacgaagccgttgaagacatggaa
gactggtacgccagccacaattactacctgaccaagattagtcagcgggccatcccttac
atgcactatatcctccacgctgtggaacagcgggatatgcccatcgatttggccctgctg
ccctttgtagagagcgccttcgacccctttgcctactcccacggtcgggccgccggcctg
tggcaatttgtacccaataccgccgagcacatgaacatccccatcgattggtggtacgac
ggccgccgggatgtgatcgtgtcaacgaatgcggccctggactacctgcaagagttgaat
gcgcgttttgatggcgactggttgcttaccctcgccgcttacaatgccggcggcggaaga
gtaaaccgcgccattacccacaaccgtaaagcgggtcgtcccactgacttttggtcactt
agacttccaagagaaacaaagcgttacatcccaaaattattggcacttgttaaggttttt
cggaaccctgccagttacaatatcaccctccctgacgctccggacgaaccctattttgcc
ttggtcaaaacgggtggacagctgtctctcagtcaggcagccaaattagccgataccact
gttgacgagctttacaagctaaacccggctttaaatcgctccaccacagcgcccaatggc
ccccacaaccttctagtgccggtggcaaaggccaagcgttttaatcaccagctggcgaaa
ctgtccccggatcagagaagagtgatcggcggcatctacaccgttaagcccggcgacacc
ctgatcagcatcgcccgtaaacaccatattgacctcgctaccctgcgcgccaccaacaag
ttgaaaggggattttctcaaggccgggcagaccttgagcatcccgatgggcgaacagcaa
tccgatgccttgaaccggggcgttgccgccgccgaccgggagaaacgtttatacaccgtt
cgccgcggcgacaacctcagcaagatcgccaaccagtttgatgtcagcacccgcgatttg
ctgcgctggaaccgcctcagtgcccgggatattattcatccgggtgaccaattgacggtg
tggatcaacagcgccagcggccgggatatgactcgcaaagtgggctacaccgtgcgcaac
ggcgattctttgtgggcgattgccagacgcttcaaggtcgacgtcgccgacatactggag
tggaattccatcacctctcgcaaccacctccgcccggggcagtcgctaaccctgttcgtc
gatatcactaccgctgatttataa
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