Sphingomonas naphthae: PQ455_13125
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Entry
PQ455_13125 CDS
T08850
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
snap
Sphingomonas naphthae
Pathway
snap01501
beta-Lactam resistance
snap01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
snap00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PQ455_13125
01503 Cationic antimicrobial peptide (CAMP) resistance
PQ455_13125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snap02000
]
PQ455_13125
01504 Antimicrobial resistance genes [BR:
snap01504
]
PQ455_13125
Transporters [BR:
snap02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PQ455_13125
Antimicrobial resistance genes [BR:
snap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PQ455_13125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
WCT72573
LinkDB
All DBs
Position
2730498..2733692
Genome browser
AA seq
1064 aa
AA seq
DB search
MISRVFIDRPILAWVIAIIIMMGGIGGIMALPVEQYPDIAPPQVNIRATYPGASAEILES
SVTQVIEQQLTGIDGMLYFTASSSSTGSVTINCTFNKGTDPDIAQVQVQNRVQQALARLP
SQVQQQGLTVTKSNPDFLLVMSIADLTDKSTNRDIADFMVSNLQDQIGRLEGVGDINVFG
AQYAMRIWLDPFKLQGFNLQPSDVTSAITAQNTQVGAGQLGAQPSPDTQMLSAIVTAKSR
LQTPEEFRNIVLRSNQNGAQVLLKDVARVELGSENYNIVSAFNGHPGAGLAVSLAPGGDA
LKTAETVKKYVTERAGSFPAGYEVDFPRDSTPFIQVSIEEVVKALFEAIVLVVIVMFVFL
GSWRATLIPAIAVPVVLLGTFGVLAIFGYSINTMTMFGLVLAIGLLVDDAIVVVENVERV
MHDEGLSPRDATIKSMGEIQTALIAIGLVLSAVFLPMAFFGGSTGVIYRQFSITVVSSMV
LSVVVALSLSPALTSTLLKPVSKDPEAAPNRATAFVRRMNQKFNAWFERVADRYLNGVKR
VLRHTALALGAYVVVIALLCLLFFRLPTGFLPGEDQGLAQIQYTLPPGATIQRTVDVAGR
IQRYFNEGPMKDDIGKVFTVVGNSQQGSGQNAGQGFIALTPWEERKGKDHSVETITQRAQ
RDLGPQLRDAQFFALNPPAVRGLGQSSGFSMQLLNTGGLSREQFKAARDKLIADAGGNPS
LSAVRTNVLEDVPTLHVNVDEKKVGALGIAQTDVNSLLGTAWGGAYVNDFVDRGRVKRVY
VQGDAQYRGKPEDLSNWFVRTGTGTMAPFSSFSRAEWTRSPVSLNRFNGTSSYEIQGQPA
AGGSSGDAMAAISELAAQIPGTSIAWSGLSYQERLSGGQAPYLYGLSLIVIFLCLAALYE
SWSIPLAVILVIPLGLVGAALAVTLRGLENDVYFQVGLLTTMGLSAKNAILIIEFAEQAE
LNGKSPMDAALEAARLRLRPILMTSLAFIFGVLPLAIATGAGAKSRVAIGTAVMGGMITA
TVLAIFLVPLFFVLVRRIFPTKLHSHGEPKADGPAPHTPEGQPA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgatcagccgggtcttcatcgatcgccccatcctggcgtgggtgatcgcgatcatcatc
atgatgggcggcatcggcggcatcatggcgctgcctgtcgagcaatatcccgacatcgcc
ccgccgcaggtgaacatccgcgcgacctatccgggcgcgtcggccgaaatcctcgaatcc
tcggtcacgcaggtgatcgagcagcagctgaccggcatcgacgggatgctgtatttcacc
gccagttcgtcctccaccggcagcgtcacgatcaactgcaccttcaacaagggcaccgat
cccgatatcgcgcaggtgcaggtgcagaaccgggtgcagcaggcgctcgcccgcctgccg
tcgcaggtgcagcagcagggcctgacggtcaccaagtccaatccggacttcctgctcgtc
atgtcgatcgccgatctgacggacaaatcgaccaaccgcgacatcgccgacttcatggtc
tccaatctgcaggaccagatcggccggctggaaggcgtgggcgacatcaacgtgttcggc
gcgcaatatgcgatgcgcatctggctcgatccgttcaagctccagggcttcaacctccag
ccgtccgacgtgacgtcggcgatcaccgcgcagaatacgcaggtcggcgccggccagctg
ggcgcccagccctcgcccgacacgcagatgctgagcgcgatcgtgaccgccaagtcgcgc
ctccagactccggaggaattccgcaacatcgtgctgcgatccaaccagaatggcgcgcag
gtgctgttgaaggatgtcgcgcgggtcgagctggggtccgaaaactacaatatcgtcagc
gcgttcaacggccatcccggcgccggcctcgccgtgagcctcgcccccggcggcgacgcg
ctgaagacggccgagacggtgaagaaatatgtcaccgagcgagccggcagcttccccgcc
ggttacgaagtggatttcccgcgcgattccacgcccttcatccaggtttccatcgaggag
gtggtgaaggcactgttcgaggcgatcgtgctggtcgtgatcgtgatgttcgtgttcctc
ggcagctggcgcgcgacgctgatcccggcgatcgcggtgccggtggtgctgctcggcacg
ttcggcgtgctcgcgatcttcggctattcgatcaacacgatgacgatgttcgggctggtg
ctcgccatcggcctgctcgtcgacgacgcgatcgtggtggtcgagaatgtcgagcgcgtg
atgcacgacgaggggctctccccgcgcgacgccaccatcaagtcgatgggtgaaatccag
accgcgctgatcgcgatcgggctggtgctgtccgccgtgttcctgccgatggccttcttc
ggcggatcgaccggcgtgatctaccgccagttctcgatcacggtcgtctcgtcgatggtg
ttgtcggtggtggtggcgctcagcctttcgccggcgctgaccagcacgctcctgaaaccg
gtttccaaggatcccgaggccgcgcccaatcgcgcgacggccttcgtccgccgaatgaac
cagaagttcaacgcctggttcgagcgggtcgccgatcgctatctcaacggggtgaagcgg
gtgctgcgccacacggcgctggcgctgggggcctatgtggtcgtcatcgccctgctgtgc
ctgctgttcttccgcctgccgacgggcttcctgccgggcgaggaccagggcctcgcccag
atccagtacacgctgccgccgggcgccaccatccagcggacggtggatgttgccggccgc
atccagcgctatttcaacgaagggccgatgaaggacgacatcggcaaggtgttcaccgtc
gtcggcaacagccagcagggctcgggccagaacgccgggcagggcttcatcgcgctgacc
ccgtgggaggaacgcaagggcaaggaccattcggtcgagacgatcacgcagcgcgcccag
cgcgatctggggccgcagctgcgcgacgcgcaattcttcgcgctcaacccgccggcggtg
cgcggcctcggccagtcgagcggcttctcgatgcagttgctcaacaccggcgggctgagc
cgcgagcagttcaaggcggcgcgcgacaagctgatcgccgatgccggcggcaacccttcg
ctctccgcggtccgcacgaacgtgctggaggacgtaccgacgctgcacgtcaacgtggac
gagaagaaggtgggcgcgctcggcatcgcccagaccgacgtcaacagcctgctcggcacc
gcctggggcggcgcctatgtcaacgacttcgtcgatcgcggccgcgtcaagcgcgtctac
gtgcagggcgacgcccagtatcgcgggaagccggaggatctttccaactggttcgtgcgg
accggcacgggaacgatggcgcccttctcctccttctcgcgcgccgaatggacccgctcg
ccggtgtcgctcaaccgcttcaacggcacgtcgtcctatgaaattcaggggcagccggcg
gcggggggctcctcgggcgatgcgatggcggccatctccgaactggcggcgcagattccg
ggcacgtcgatcgcctggtcgggtctctcctatcaggagcggctgtcgggcgggcaggca
ccctatctctacggcctgtcgctgatcgtgatcttcctgtgcctcgcggcgctgtacgaa
agctggtcgatcccgctggcggtgatcctcgtcatcccgctgggcctcgtcggcgcggcg
ctggcggtgacgctgcgcggcctggagaatgacgtctattttcaggtcggcctgctgacg
acgatggggctttccgccaagaacgccatcctcatcatcgaattcgccgaacaggccgaa
ctgaacgggaagtcgccgatggatgccgcgctggaggccgcgcgcctgcgcctccgcccg
atcctgatgaccagcctcgcctttatcttcggcgtgctgccgctggccatcgcgacgggc
gcgggcgccaagagccgggtcgcgatcggcacggcggtgatgggcgggatgattaccgcg
acggtgctggcgatcttcctggtgcccttgttcttcgtgctggtgcggcggatcttcccg
accaagctgcacagccatggcgagccgaaggccgatggccccgccccgcatacgccagag
gggcagccggcatga
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