Sneathiella marina: NBZ79_06680
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Entry
NBZ79_06680 CDS
T08200
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
snea
Sneathiella marina
Pathway
snea00521
Streptomycin biosynthesis
snea00523
Polyketide sugar unit biosynthesis
snea00541
O-Antigen nucleotide sugar biosynthesis
snea01100
Metabolic pathways
snea01110
Biosynthesis of secondary metabolites
snea01250
Biosynthesis of nucleotide sugars
Module
snea_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
snea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NBZ79_06680 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NBZ79_06680 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NBZ79_06680 (rfbC)
Enzymes [BR:
snea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NBZ79_06680 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
MAAL_N
Motif
Other DBs
NCBI-ProteinID:
USG62661
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All DBs
Position
1396388..1396957
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AA seq
189 aa
AA seq
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MEIEDTAIADVKILSPKKFGDHRGFFSEVWNERTLADAGLDLRFVQDNHALSAEAGTLRG
LHYQLDPAAQGKLVRVVRGAVLDVAVDIRAGSPTFGQHVAVELSADNWRQLWVPRGFAHG
YCTLQPNTELVYKVTDYYSPDHDCGIFWNDPALGIKWPVAPEKAILSEKDTVLPRLQDQT
RLFDFEGKT
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaagacacagccatagcggatgtaaagattctaagcccgaaaaaattcggg
gatcatcgcgggtttttctccgaggtctggaatgaacggacattggcggatgccggactg
gaccttcggtttgtacaggacaatcatgctttgagcgctgaggcaggcacattgcggggg
ttgcattatcagctggacccggcggcgcagggcaagctggtccgtgttgttcgcggtgct
gtcctggatgtggcggtggatatccgggccggatccccgacttttggccagcatgtggcg
gttgagctgtcggcggataactggcggcagctttgggtgccgcgcggatttgcccatgga
tactgcactttgcagccgaacactgaactggtttacaaggtcacggattactatagcccg
gaccatgattgcggtattttctggaatgaccctgccttggggatcaagtggcctgtggca
ccggaaaaggcgatcctgtccgaaaaagatacggttttgccccggctgcaagatcaaaca
agattattcgatttcgagggaaagacatga
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