Serratia nematodiphila: NLX84_05270
Help
Entry
NLX84_05270 CDS
T08619
Symbol
sdeY
Name
(GenBank) multidrug efflux RND transporter permease subunit SdeY
KO
K18138
multidrug efflux pump
Organism
snem
Serratia nematodiphila
Pathway
snem01501
beta-Lactam resistance
snem01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLX84_05270 (sdeY)
01503 Cationic antimicrobial peptide (CAMP) resistance
NLX84_05270 (sdeY)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_05270 (sdeY)
01504 Antimicrobial resistance genes [BR:
snem01504
]
NLX84_05270 (sdeY)
Transporters [BR:
snem02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NLX84_05270 (sdeY)
Antimicrobial resistance genes [BR:
snem01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NLX84_05270 (sdeY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UTO02488
LinkDB
All DBs
Position
complement(1125117..1128263)
Genome browser
AA seq
1048 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIIVMLAGVLAIMKLPIAQYPTIAPPAVSISATYPGADAKTVQDT
VTQIIEQNMNGIDNLMYMSSTSDSSGSVTITLTFESGTDPDIAQVQVQNKLSLATPLLPQ
EVQQQGLKVEKSSSSFLMVAGFVSDDPNMTQDDIADYVASNIKDPISRSSGVGEVQLFGA
QYAMRIWLDPNKLNNYQLTTTDVTSAITEQNNQIAAGQLGGLPPVPGQQLNASIIAQTRL
TSPEEFGKILLKVNTDGSQVRLRDVAHIERGAESYAVTARYNGKPAAGLGIKLATGANAL
NTAKGVKDELAKMEPFFPQGMKVVYPYDTTPFVKISINEVVKTLIEAIILVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
SEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL
SVLVALILTPALCATLLKPIPKGDHGVKTGFFGWFNRMFEKSTHHYTDSVGNILRSTGRY
LIIYLLIVVGMGLLFLRLPSSFLPDEDQGILLTMVQLPAGATESRTNKVLEEVSDYFLNK
EKDNVVSVFTVAGFGFNGNGQNNGLAFVSLKDWGERPGAGNKVEAIAGRAMGAFSQIKEG
LVFPCNLPAIIELGTATGFDFELIDQGGLGHEKLTEARNQLLGMVAQHPDVLVGVRPNGL
EDTPQFKLIVDQEKAKALGVSITTINSTLSTALGGSYVNDFIDRGRVKKVYVQAEAPFRM
LPEDINKWYVRGTSGQMVPFSAFSSAKWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAM
NLMEQLASKLPSGIGYDWTGMSYQERLSGNQAPALYAISILVVFLCLAALYESWSVPFSV
MLVLPLGVIGALLAATMRGMNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLI
EATLEAVRMRLRPILMTSLAFILGVLPLVISSGAGSGAQNAVGTGVMGGMITATVLAIFF
VPVFFVVVRRRFSKKNEDLEHSHPVEHH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttctttatagaccgcccaattttcgcctgggtaatcgccatcatcgtcatg
ttggcgggggtgcttgcaataatgaaactgccgatcgcgcagtatcccactattgcaccg
ccggcggtgagtatttccgccacctacccgggcgcagatgccaaaacggtgcaggatacc
gtcacgcagattatcgaacagaacatgaacggtatcgataacctgatgtacatgtcctcc
accagtgattcctctggtagcgtcaccattactctgacgtttgaatccggtaccgatcct
gacatcgcgcaggttcaggttcagaacaaactgtcgttggccaccccgttgctaccgcaa
gaagttcagcaacagggcctgaaagtagaaaaatccagcagcagcttcctgatggtggcc
ggcttcgtttccgacgatccgaacatgacgcaggacgatattgcggactacgtggcgtcc
aacatcaaggatccgatcagccgttcgtccggcgtgggtgaggtgcagctgttcggtgcc
cagtacgcgatgcgtatctggctggatccgaacaagctgaacaactaccagctgacgacc
acggacgtgacctccgccatcaccgagcagaacaaccagatcgccgctggccagctgggc
ggcctgccgccggtgccggggcagcagttgaacgcctcgatcatcgcgcagacccgtctg
acttcgccggaagagttcggcaagatcctgctgaaggtgaataccgacggttcccaggtg
cgcctgcgcgacgtcgctcacatcgagcgcggcgcggaaagctatgccgttaccgcgcgt
tataacggcaagcctgccgccggcctgggtatcaaactggcaaccggcgccaacgccttg
aacaccgccaaaggtgtgaaagacgagctggccaagatggagccattcttcccgcaaggg
atgaaagtggtttatccgtacgacaccaccccgttcgttaaaatctccatcaacgaagtg
gtgaaaacgctgatcgaagccatcatcctggtgttcctggtgatgtatctgttcctgcag
aacttccgcgcgacgctgatcccaaccatcgcggtgccggtagtactgttggggaccttt
gcgatactcgcggcgttcggcttctcgataaacaccctgacgatgttcggcatggtgttg
gcgatcggcctgctggtggatgacgccatcgtggtggtggaaaacgtcgagcgcgtcatg
tccgaagaggggctgccgccgaaagaagccacccgtaaatcgatgggccagatccagggc
gcgctggtgggcatcgccatggtgctgtcagcggtattcgtgccgatggcgttctttggc
ggctcaaccggcgccatctatcgccagttctcgatcaccatcgtgtccgcgatggcgctg
tcggtgctggtggccttgatcctgacgccggcgctgtgcgccaccctgctcaaaccgatc
ccgaaaggcgatcacggggttaaaacaggcttcttcggctggtttaaccgcatgttcgag
aagagcacgcatcactataccgacagcgtgggcaacatcctgcgcagcaccggccgctat
ctgatcatctacctgctgatcgtggttggcatgggcctgctgttcctgcgcctgccttcc
tcgttcctgccggacgaagatcagggcatcctgttgaccatggtgcagttgcctgccggc
gccaccgagtcccgcaccaacaaagtgctggaagaagtctctgactacttcctgaacaag
gaaaaggacaacgtggtttcggtgtttaccgtcgcgggcttcggcttcaacggtaacggc
cagaacaacggcttggcattcgtcagcctgaaagactggggcgagcgtccgggggccggg
aacaaggtcgaagcgatcgccggtcgcgccatgggcgccttctcacagattaaagaaggc
ctggtgttcccgtgcaacctgccggcgattatcgaactcggtaccgcaaccggcttcgac
ttcgagctgattgaccagggcggcctggggcacgaaaaactgaccgaagcgcgtaaccag
ctgttgggcatggttgctcagcatccggatgtgctggtgggcgtgcgcccgaacggcctg
gaagataccccgcagttcaaactgatcgtcgatcaggagaaagccaaggcgttgggtgtc
agcatcaccaccattaacagcacgctgagcaccgcgctgggtggctcgtacgtcaacgac
ttcatcgaccgcggtcgtgtgaagaaggtgtacgtacaggccgaagcgccgttccgcatg
ctgccggaagacatcaacaagtggtacgtgcgcggtaccagcggccagatggtgccattc
tccgccttctcctcggcgaaatgggaatacggctcaccgcgtctggaacgctataacggc
ttgccgtcgatggaaattctgggccaggccgcaccgggcaagagtaccggtgaagcgatg
aacctgatggaacagctggcgtccaaactgccaagcggcatcggttacgactggaccggc
atgtcctatcaggaacgtctgtcgggcaaccaggcgccggcgctgtacgctatctcgatt
ctggtggtgttcctgtgtctggcggcgctgtatgaaagctggtccgtgccgttctcggtc
atgctggtattgccgctgggggttatcggtgcgttgttggccgcgacaatgcgcggcatg
aacaacgacgtgtacttccaggtagggctgctgactaccattggtctatcggcgaagaac
gccatcctgatcgtggaattcgccaaagacctgatggaaaaagaaggcaaaggcctgatc
gaggcgacattggaagcagtgcgtatgcgtctgcgtccaatcctgatgacgtccctggcc
ttcatcctcggggttctgccgctggttatcagcagcggtgcgggctccggcgcacagaac
gcggttggtaccggcgttatgggcgggatgatcaccgctaccgtcttggcgatcttcttc
gtaccggtgttcttcgtggtggttcgccgccgcttcagcaagaagaacgaagacctggaa
cacagccatccggtagagcaccactga
DBGET
integrated database retrieval system
