Serratia nematodiphila: NLX84_05960
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Entry
NLX84_05960 CDS
T08619
Name
(GenBank) carbohydate-binding domain-containing protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
snem
Serratia nematodiphila
Pathway
snem00511
Other glycan degradation
snem00520
Amino sugar and nucleotide sugar metabolism
snem00600
Sphingolipid metabolism
snem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
NLX84_05960
09103 Lipid metabolism
00600 Sphingolipid metabolism
NLX84_05960
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
NLX84_05960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
snem03110
]
NLX84_05960
Enzymes [BR:
snem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
NLX84_05960
Chaperones and folding catalysts [BR:
snem03110
]
Intramolecular chaperones
Others
NLX84_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
UTO02616
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All DBs
Position
1277477..1280134
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AA seq
885 aa
AA seq
DB search
MNTFKLSALAALTATMGFLGGMGNAMADQQLVDQLSQLKLNVKMLDNRAGENGVDCAALG
ADWASCNRVLFTLSNDGQAIDGKDWVIYFHSPRQTLRVDNDQFKIAHLTGDLYKLEPTAK
FSGFPAGKAVEIPVVAEYWQLFRNDFLPRWYATSGDAKPKMLANTDTENLDQFVAPFTGD
QWKRTKDDKNILMTPASRFVSNADLQTLPAGALRGQIVPTPMQVKIHAQDADLRKGVSPD
LSTLVKPAADVVNQRFALLGVPVQANGYPIKTDIQPGKFKGAMAVPGAYELKIGKKEARV
IGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFQYRGIFLDVARNFHKKDAVLRL
LDQMAAYKLNKFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVY
GGFFSRQDYIDIIKYAQARQIEVIPEIDMPAHARAAVVSMEARYKKLYAAGKEQEANEFR
LVDPTDTSNTTSVQFFNRQSYLNPCLDSSQRFVDKVIGEIAQMHKEAGQPIKTWHFGGDE
AKNIRLGAGYTDKAKPEPGKGIIDQSNEDKPWAKSQVCQTMIKEGKVADMEHLPSYFGQE
VSKLVKAHGIDRMQAWQDGLKDAENAKAFATSRVGVNFWDTLYWGGFDSVNDWANKGYEV
VVSNPDYVYMDFPYEVNPDERGYYWGTRFSDERKVFSFAPDNMPQNAETSVDRDGNHFNA
KSDKPWPGAYGLSAQLWSETQRTDPQMEYMIFPRALSVAERAWHRAGWEQDYRAGREYKG
GETHFVDTKALEKDWLRFANILGQRELAKLDKGGVAYRLPVPGARVAGGKLEANIALPGL
GIEYSTDGGKQWQRYDAKAKPAVSGEVQVRSVSPDGKRYSRAEKV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattcaaactgagcgcactggccgctttgacggcaacgatgggattcctgggc
ggcatgggtaatgccatggccgatcaacagctggtggatcagctgagccagctaaagctg
aacgtgaaaatgctggataaccgcgccggcgaaaacggcgtggattgcgcggcgctgggc
gccgactgggcctcatgcaaccgggtgttgttcaccctcagcaacgacgggcaggcgatc
gacggcaaggactgggtcatctatttccacagcccgcgccagaccctgcgggtggataac
gatcagttcaagatcgcgcatctgaccggcgatctgtacaagctggagccgaccgccaaa
ttcagcggtttccctgccggcaaggcggtggaaatcccggtggtcgccgaatattggcag
ctgttcagaaacgacttcctgccgcgctggtatgccacctccggcgacgccaagccgaaa
atgctggcgaataccgacaccgaaaacctggaccagttcgtggcgccgttcaccggcgat
cagtggaagcgcaccaaggacgacaaaaacattctgatgacgccggcttcgcgctttgtc
agcaatgccgatctgcagacgttgcccgccggcgcgctgcgcggccagatcgtgccgaca
ccgatgcaggtgaagatccacgcacaggacgccgacctgcgcaaaggggtatcgccggat
ctgagcacgctggtcaagccagcggcggacgtcgtcaaccagcgcttcgcgctgctgggc
gtgccggttcaggccaacggttacccgatcaagaccgacatccagccgggcaagtttaaa
ggtgcgatggccgtgccgggcgcttatgagctgaaaatcggtaagaaagaggcgcgggtg
atcggcttcgatcaggccggggtgttctacgggttgcagtcgatcctgtcgttagtgccg
agcgacggcagcggcaagatcgccacgctcgacgccagcgatgcgccgcgcttccagtat
cgcggcattttcctcgacgtggcgcgcaacttccataagaaggacgcggtgctgcgtctg
ctggatcagatggcggcttacaagctcaataaattccacttccacctgagcgatgacgaa
ggctggcgcatcgagatccccggtttgccggagctgactgaagtcggcggccagcgctgc
cacgatctgagcgaaaccacctgcctgctgccgcagtacggccaggggccggacgtctac
ggcggcttcttcagccgtcaggactatatcgacatcatcaaatacgcccaggcgcgccag
attgaggtgatcccggagatcgacatgccggcgcacgcccgcgccgcggtggtgtcgatg
gaggcgcgctataaaaagctgtatgctgccggcaaagagcaggaggccaacgaattccgc
ctggtggatccgaccgatacctccaataccacctcggtgcagttctttaaccgccagagc
tacctgaacccgtgcctggattcctcccagcgctttgtcgacaaggtgattggcgagatt
gcccagatgcataaagaagctgggcagccgatcaaaacctggcacttcggcggcgatgag
gcgaaaaacatccgcctgggcgccggctataccgacaaggcgaaaccggagccgggtaaa
ggcatcatcgaccagagcaacgaagacaagccatgggccaagtcgcaggtttgccagacg
atgatcaaagaaggcaaggtggccgacatggaacacctgccgagctacttcggccaggag
gtcagcaagctggtgaaggcgcacggcatcgacagaatgcaggcctggcaagacggcttg
aaagacgccgagaacgcaaaggcgttcgccacctcgcgcgtgggcgtcaacttctgggat
acgttgtactggggcggtttcgatagcgtcaacgactgggccaacaaaggatatgaagtg
gtggtctccaacccggactacgtctacatggacttcccttacgaggtgaacccggacgag
cgtggttactactggggcacccgcttcagcgacgagcgcaaggtgttcagcttcgcgccg
gacaacatgccgcagaacgcggaaacctcggtcgaccgcgacggcaaccactttaacgcc
aaaagcgacaagccatggccgggcgcctacggtttgtccgctcagctgtggagcgaaacc
cagcgcaccgatccgcagatggaatacatgatcttcccgcgcgcgctgtcggtggcggaa
cgcgcctggcaccgcgccggttgggagcaggactatcgcgccggacgtgaatacaaaggc
ggggaaacccactttgtcgacaccaaggcgctggagaaagactggctgcgcttcgccaat
atcctgggccaacgagaactggccaagctggacaagggcggcgtcgcctaccgtctgccg
gtgccgggcgcccgcgtggcgggcggcaagctggaggcgaatatcgcgctgccgggattg
ggcatcgagtactccaccgacggcggcaagcagtggcagcgttatgacgccaaggccaag
ccggcggtatcgggtgaggtgcaggtgcgttcggtcagtccggacggtaaacgctacagc
cgcgccgagaaggtctaa
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