Serratia nematodiphila: NLX84_12535
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Entry
NLX84_12535 CDS
T08619
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
snem
Serratia nematodiphila
Pathway
snem01501
beta-Lactam resistance
snem01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NLX84_12535
01503 Cationic antimicrobial peptide (CAMP) resistance
NLX84_12535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snem02000
]
NLX84_12535
01504 Antimicrobial resistance genes [BR:
snem01504
]
NLX84_12535
Transporters [BR:
snem02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NLX84_12535
Antimicrobial resistance genes [BR:
snem01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NLX84_12535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
DUF4232
Motif
Other DBs
NCBI-ProteinID:
UTO03800
LinkDB
All DBs
Position
complement(2624477..2627614)
Genome browser
AA seq
1045 aa
AA seq
DB search
MAQFFIRRPVFAWVIAIIIMLCGLMSINSLPISQYPDVSPPQISISATYPGADAETLENS
VTQVIEQQLTGLDGLLYFSSTSSSSGSVSIDVTFDQGTDPDIAQVQVQNKVQQAESRLPS
AVTAQGVTVKKSQSSFLLIVGLYDETDKATMADISDYLVSNLQDPLSRIEGVGDVQVFGS
EYAMRIWLDPTRLASYALMPSDVQTAIEAQNTQVSAGKVGDLPAVADQQLTATVKAQSRL
QTPEQFRNIILKSDSSGALVRLGDVARVELGNEDYSASAHLNGHPAAGIAVKLAAGANAL
STAKLVKAKVAEYQSAMPQGYKVAYPKDSTDFINISIEEVVKTLFEAVVLVVVVMFVFLQ
NLRTTLIPTITVPVVLLGTFGVLAAFGYSINTLTLFGMVLAIGLLVDDAIVVVENVERVM
REDKLPPREATEKSMREITGALVGIALVLSAVFLPMAFFGGSTGVIYRQFSITVVSSMML
SVVLALTLAPALCATLLKSTHKEQTDKGLLGKFNRGYNRLQEKYADKVGGVIHRPTRYLL
LYGLLLIATAVMYLRLPTGFLPNEDQGSVMVQYTLPAGATNARTSAVSEAVTAYFLEQEK
PNVSTIFTINGFGFSGSGQNAGMAFVSLKDWSQRGGSENTADAIAKRAMAHFASLRDAQV
FSMSPPAIDGFGQSDGFTFELQAKGATTRAELQAMRDQIVAAAAGNPSLLAVRANTLPDT
PQLQVEIDSGKLQALGLSAGDVNSTLSSAFGSTYVNDFIDRNRVKKVYMQGDVAYRAKPE
DLDKWFVRGTNAAGDSSMTPFSAFASSHWIYGPENLSRYNGLSSFEITGQGAAGVSSGTA
MSEMEKLAAKFSAGSSYSWSGLSYQERLTSGQASSLYAISLIVVFLCLAALYESWSIPFA
VMLVVPMGIVGSLLAITLRGLENDIYFQVALLTIVGLSAKNAILIVEFAEEMHQRGETLI
GAAVHAARMRLRPILMTSLAFTAGVLPLAVSSGAGANSRIAIGTGIIGGTLTATALAIFF
VPLFYVLVRRMFTRRPANSPSQAGE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagttctttatccgccgcccggtgttcgcctgggtgatcgccatcatcatcatg
ctgtgcggcctgatgtcgatcaattcgttgcccatctcgcagtacccggacgtgtcaccg
ccgcagatttccatctccgccacctacccgggcgcggacgcggaaacgctggaaaacagc
gtcacccaggtgatagagcagcagctcaccgggctggatggcctgctgtatttctcttca
accagcagctccagcggctcggtcagcatcgacgtcacctttgatcagggcaccgatccg
gatatcgcgcaggtgcaggtgcaaaacaaagttcagcaggcggaaagccgcttgccgagc
gcggtcaccgcccaaggcgtgacggtcaagaaatcccagagcagctttctgctgatcgtc
gggctgtatgacgagaccgacaaggcgacgatggccgacatttccgactatctggtcagc
aacctgcaggatccgctgtcgcgcatcgagggcgtgggggacgtgcaggtgttcggctcg
gaatacgcgatgcgcatctggctggatccgaccaggctggcgagctatgcgctaatgcct
tccgacgtgcagacggcgatcgaggcgcaaaacacccaggtgtccgccggcaaggtaggc
gatctgccggccgtcgccgaccagcagctgaccgccacggtgaaggcgcagtcccggctg
caaacgccggaacagttccgcaatatcatcctgaaaagcgacagcagcggtgcgctggtg
cggctgggcgacgtggcgcgggttgaactgggcaacgaagactactccgccagcgcgcac
ctcaacggccacccggcggcggggatcgcagtcaagctggcggcgggcgccaacgccctg
agcaccgccaagctggtaaaggccaaggtggcggaatatcaaagcgcgatgccgcagggt
tataaggtggcctacccgaaagacagcaccgacttcatcaacatctcgatcgaggaggtg
gtgaaaacgctgttcgaagcggtggtcctggtagtggtggtgatgttcgtgttcctgcaa
aacctgcgcaccacgctgatcccgaccatcaccgtgccggtggtgttgctgggcaccttc
ggcgtgctggcggcgttcggctactcgatcaataccctgacgctgttcggcatggtattg
gcgatcgggctgttggtggacgacgccatcgtggtggtggaaaacgtcgaacgcgtgatg
cgtgaagataagctgccgccgcgcgaggcgacggagaaatcgatgcgcgagatcaccggc
gcgctggtcggcatcgcgctggtgctgtcggcggtgtttctgccgatggcgttcttcggt
ggttccaccggggtgatctaccgccagttctcgatcaccgtcgtctcctcgatgatgctg
tcggtggtgctggcgttgacgctggcgccggcgctgtgcgccacattgctgaaatcgacg
cataaagaacagaccgacaaagggctgctgggtaaattcaaccgcggttataaccggctg
caggagaagtacgccgacaaggtcggcggggtgatccaccggccgacgcgctatctgctg
ctgtacggcctgctgctgatcgccaccgccgtgatgtatctgcgtttgccgaccggtttc
ctgcccaatgaggatcagggttcggtgatggtgcagtacaccttgccggccggcgccacc
aatgcccgcacctcggcggtgagcgaggcggtcaccgcctatttcctcgagcaggaaaag
cccaacgtcagcactattttcaccatcaacggcttcggtttcagcggcagcgggcaaaac
gccggcatggcgttcgtcagcctcaaagactggagccaacgcggcggcagtgaaaacacc
gccgacgccatcgccaagcgcgccatggcgcatttcgcctcgctgcgcgacgcccaggtg
ttctccatgagcccgccagcgatcgacggcttcggccagtccgacggcttcaccttcgaa
ctgcaggccaaaggggcgaccacccgcgccgagctgcaggcgatgcgcgatcagatcgtc
gccgccgccgccggcaatccgtcgctgttggcggtgcgcgccaacaccttgccggacacg
ccgcagctgcaggtggagatcgacagcggcaaactgcaggcgctcggcctgagcgccggc
gacgtcaacagcacgctcagcagcgcgttcggcagcacctacgtcaacgactttatcgat
cgcaaccgggtgaaaaaagtctatatgcagggcgacgtagcgtatcgcgccaagccggaa
gatctcgacaaatggtttgtgcgcggcaccaacgcggcgggcgacagcagcatgacgcca
ttctccgcctttgcttcctcacactggatctacggcccggaaaacctgtcgcgctataac
gggctgtcgtcgttcgagatcaccgggcagggcgccgccggcgtcagttccggcacggcg
atgagcgagatggagaaactggcggcgaagttctccgccggcagcagctattcctggagc
gggctctcctatcaggagcggctgaccagcggccaggcatcgtcgctgtacgccatttcg
ctcatcgtggtgttcctgtgcctggcggcgctgtatgagagctggtcgattccgtttgcg
gtgatgttggtggtgccgatgggcatcgtcggttcgctgcttgcgatcacgctgcgcggg
ctggagaacgatatctacttccaggtggcgctgctgaccatcgtcggtttgtcggcaaaa
aacgccattctgatcgtcgagttcgccgaggaaatgcaccagcgcggtgaaacgctgatt
ggcgcggcggttcacgcggcgcgcatgcgcctgcggccgatcctgatgacctcgctggcg
tttaccgccggggtgctgccgctggcggtatccagcggcgccggcgccaacagccgcatc
gccatcggtaccggcattatcggcggcactcttaccgccaccgcattggcgatctttttc
gtcccgctgttttatgtgctggtgcgccgcatgtttacccgtcggcccgccaactcgccg
tcgcaggcaggagaataa
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