Serratia nematodiphila: NLX84_20765
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Entry
NLX84_20765 CDS
T08619
Symbol
mrcB
Name
(GenBank) bifunctional glycosyl transferase/transpeptidase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
snem
Serratia nematodiphila
Pathway
snem00550
Peptidoglycan biosynthesis
snem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NLX84_20765 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snem01003
]
NLX84_20765 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snem01011
]
NLX84_20765 (mrcB)
Enzymes [BR:
snem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NLX84_20765 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NLX84_20765 (mrcB)
Glycosyltransferases [BR:
snem01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NLX84_20765 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
snem01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NLX84_20765 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
PBP1_TM
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
UTO00781
LinkDB
All DBs
Position
complement(4366994..4369495)
Genome browser
AA seq
833 aa
AA seq
DB search
MAGDDREPIGRKGKQPKSTASRKPPRRRRDDDYDDYEEDEYDDDEYEEEEERMPRKVKAT
PPRKKRRWLGLIIKLILVLAVLLAIYGVYLDSQIRSRIDGKVWQLPAAVYGRMVNLEPGM
PYSKKEMVNLLEGMQYRQVSRMTRPGEFTVQANSIEMLRRPFDFPDGKEGQIRARLDFQN
NRLAKIENLDSGRSFGFFRLDPRLITMLQSPNGEQRLFVPRSGFPDLLVDTLIATEDRHF
YEHDGISPYSIGRAVLANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALLV
DYRYSKDRILELYLNEVYLGQSGGDQIRGFPLASLYYFGRPVDELSLDQQALLVGMVKVA
SLYNPWRNPKLALERRNLVLKLLQNQGVIDGELYDMLSARPLGVQPKGGVITPQPAFMQM
VRQELQSKLGDKVNDLSGVKIFTTLDPVSQDAAEKAVEDGIPALRAARHLQDLEAAMVIV
DRFSGEVRAMVGGANPQFAGFNRAMQARRLVGSLAKPPTYLTALSEPDKYRLNTWLADAP
LSLKQPNGAVWQPNNYDRKFRGQVMLVDALANSLNVPTVNLGLSVGLDQISATLQRLGIP
KAEINPVPSMLLGAIGLTPMEVAQEYQTIASGGNRAPLSAVRSVIAEDGTVLYQSFPQAE
RMVPAQAAYLTLYAMQQGVARGTSRSLSVKFPNYNLAAKTGTTNDLRDSWFAGIDGKEVA
IAWVGRDNNGPAKLTGANGALTLYRRYLENQTPLPLMLQPPEGINQMSIDSAGNFICGGG
SWRTIPVWTDNPQGLCQASQAAVQQQQQQQQPAAGEQKDGDGVAGWIKDMFGQ
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggctggggatgaccgcgagcccatcgggcgcaaaggaaaacaaccaaaaagcaccgcg
tcgcgcaagccgccgcgccgtcgccgagacgacgattatgacgattacgaagaagacgag
tatgacgatgatgagtatgaagaggaggaggaacgcatgccgcgtaaggtaaaagcgact
ccgccgcgtaaaaaacgccgctggctcggcctgattatcaaactgatcctggtgctcgcc
gtcctgttggcgatctacggcgtctatttggattcccagatccgcagccgcatcgacggc
aaagtctggcaattgccggcggcggtgtacggccgcatggtcaacctggaaccgggcatg
ccgtacagcaagaaggagatggtcaacctgctggaagggatgcagtatcgccaggtcagc
cgcatgacgcgtccgggcgagtttaccgtacaggccaacagcatcgagatgctgcgtcgc
ccgttcgacttcccggatggtaaagaagggcagatccgcgcccgcctcgatttccagaac
aaccgcctggcgaagatcgaaaacctggacagcggccgcagcttcggcttcttccgcctc
gatccgcgtcttatcaccatgctgcagtcgccgaacggtgaacagcgcctgttcgtgccg
cgctccggtttcccggatctgttggtggatacgctgatcgccacggaagaccgccacttc
tatgagcatgacggcatcagcccgtactccatcggccgtgcggtgctggccaacctgacc
gccggccgtgcggtgcagggcggcagtactctgacgcagcagctggtgaagaacctgttc
ctgaccaacgaacgttcgctgtggcgtaaggccaacgaagcctatatggcgctgttggtc
gattaccgttacagcaaggatcgcattctggagctgtatctgaacgaggtgtatctcggc
cagagcggcggcgaccagatccgcggcttcccgctggccagcctgtattacttcggccgc
ccggtggacgagctgagcctcgatcagcaggcgctgctggtcggcatggtcaaggtcgcg
tcgttgtacaacccgtggcgtaacccgaaactggcgctggaacgccgcaacctggtgctc
aaactgctgcagaaccagggtgtgatcgacggcgagctgtatgacatgctgagcgcgcgt
ccgctgggcgtacagccgaaaggcggcgtcattacgccacagccggcgtttatgcagatg
gtgcgccaggaactgcagagcaagctgggcgataaggtcaatgacctgtccggcgtgaag
atcttcaccacgctggatccggtgtcgcaagacgcggcggaaaaagcggtcgaagacggc
atcccggcgctgcgcgccgcgcgtcacctgcaggatctggaagcggcgatggtgatcgtc
gatcgcttcagcggtgaagtgcgcgccatggtcggcggcgccaatccgcagttcgccggt
ttcaaccgcgccatgcaggcgcgccgtttggtcggctcgctggccaagccgccgacgtat
ctgaccgcgctgtccgaaccggataaataccgcctcaacacctggctggcggatgcgccg
ctgtcgctgaaacagccgaacggcgccgtctggcagccgaacaactacgatcgcaaattc
cgcggtcaggtgatgctggtggatgcgttggccaactcgctgaacgtgccgacggtgaac
ctcggcctgtcggtcgggctggatcagatcagcgccacgctgcaacgcctcgggatcccg
aaagcggagatcaacccggtgccttcgatgctgctgggggcaatcggcctgacgccgatg
gaagtggcgcaggaataccagaccatcgccagcggcggtaaccgtgcgccgctgtcggcg
gtgcgttcggtgatcgccgaagacggcacggtgctgtaccagagcttcccgcaggcggag
cgcatggtgccggcgcaagccgcttacctgacgctgtacgcgatgcagcagggcgtggcg
cgcggaacctcccgctcgctgtcggtgaagttcccgaactacaacctggcggcgaaaacc
ggtaccaccaacgatctgcgcgacagctggttcgcaggcatcgacggcaaggaagtggcg
atcgcctgggtggggcgcgataacaacggtccggccaagctgaccggcgccaacggcgcg
ttgaccctctatcgccgctatctggaaaaccagacgccgctgccgctgatgttgcagccg
ccggagggcattaaccagatgagcatcgactctgccggcaactttatctgcggcggcggc
agttggcgcaccatcccggtctggaccgacaatccgcagggattgtgccaggccagccag
gcggcggtgcagcagcaacagcaacagcaacagccggcggcgggtgagcaaaaagatggc
gatggcgtcgccggctggatcaaggatatgttcggccagtaa
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