Simkania negevensis: SNE_A11020
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Entry
SNE_A11020 CDS
T01559
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sng
Simkania negevensis
Pathway
sng03030
DNA replication
sng03430
Mismatch repair
sng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SNE_A11020
03430 Mismatch repair
SNE_A11020
03440 Homologous recombination
SNE_A11020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sng03032
]
SNE_A11020
03400 DNA repair and recombination proteins [BR:
sng03400
]
SNE_A11020
Enzymes [BR:
sng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SNE_A11020
DNA replication proteins [BR:
sng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SNE_A11020
DNA repair and recombination proteins [BR:
sng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SNE_A11020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCB88979
UniProt:
F8L865
LinkDB
All DBs
Position
gsn.131:1141580..1142614
Genome browser
AA seq
344 aa
AA seq
DB search
MMKFVKAEAFEKQLDESLPEHPSPLYGVALEDPFERQFVIERLIQQIGGEAHWMRSSETS
LATFIEELDSPSLFASKRVLIYDEVEKIKKGEFIETRLTDLPDGMHVICGGSEIGFYEPL
KKEMVFLDLSQEKPWERTNRLKRWLLQEVKRGGKMMSADAAAYLSEFCSTNFEALIQEVQ
KLITYVGDAPEIDLQAVRAIATLQVSQKGWQLSEAMIWGGDIHFPTLHRLDGQELYSFLG
QLRYQLQLGLVIASCMKRKEEQQLLQEYPKLPQKSLDRYKRLAETLSVDYFKEGLKDLFE
LELQSRMKVADLPLLFDRFIGGLILKQLKKSALDNAKVFGIRRS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttgttaaggcagaagcctttgaaaaacaattagatgaatcgcttcctgag
catccttctcctctttacggggtggcgctcgaagacccttttgaacggcagtttgtgatt
gaaagactgattcagcaaatcggcggtgaagctcattggatgcgcagcagtgaaacctct
cttgcaacttttatagaggagttagattctccttctctttttgcttcgaaaagagttcta
atctatgacgaggttgaaaagatcaagaaaggggagtttattgaaaccagactaacggac
ctgcccgacggcatgcatgtgatctgtggagggagtgagattggtttttatgagcccctc
aaaaaagagatggtctttcttgatctatctcaggaaaagccttgggaacggacaaatcga
ttaaaacgttggcttcttcaagaagtgaagcgaggcggcaagatgatgtctgcagatgca
gctgcctatctttctgagttttgctcaactaattttgaagctctaatacaagaagtgcaa
aaactcataacttacgttggcgatgcccctgaaattgatttgcaagctgtgcgcgcaatt
gcaacccttcaagtttcccaaaaaggatggcaactttccgaagcgatgatttggggtggt
gacatccattttccgacattgcaccggttagacggacaagaactctattcatttcttggc
caactccgttaccaactccagttggggctcgtcattgcatcgtgcatgaaaagaaaagaa
gagcagcaactcttgcaagagtatcccaagcttccgcagaaatctctcgatcgatataaa
cgactcgccgaaacactttctgttgactattttaaggaaggcctcaaagatctttttgaa
cttgaattgcaatcgaggatgaaagttgcagatctgcctcttctcttcgaccgctttatt
ggaggacttatactcaaacaacttaaaaaatcggctttagataacgccaaagttttcgga
atacgtcgatcttaa
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