Salvelinus namaycush (lake trout): 120017788
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Entry
120017788 CDS
T07522
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120017788
Membrane trafficking [BR:
snh04131
]
Protein recycling
Others
Others
120017788
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
120017788
NCBI-ProteinID:
XP_038816688
UniProt:
A0A8U0P133
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Position
Sna22:complement(21426653..21478158)
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AA seq
1120 aa
AA seq
DB search
MPPPATLNKVTVNNTRHNTINSFGRENRLKRHELSKNKAGSSLRNLRRRRKRSFQTAESK
TSWSGFRWNSEDASTSGQHELKLSSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKYFDF
SLGSVTESSLWRSTDYGTTYEKLDEKVGPKTILSYLYVSPNNKRKIMLLTDPEVESSLLI
SFDEGASYQRYHLAFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGRRWQLVHDSVVPNR
FYWSKLGLDKEPGMIHLETSVSDRRSQYITCKLQNCTEANKGRPFPGFISPDSLVVQDQY
VFIQVPMGGRPVHYVSYKRNAFFPMKLPKYTFPKDLQIISTDDNQVVAAVQDWHQNDSYN
LYMSEARGLFFTLALENVVSSGGPEGNVMIDLYEVAGIKGVFLSNKVVENEVKTFITYNK
GRDWRLLHAPTTDLSGTRLYCVQPYCSLHLHLHVSDNPYTSGNIVSKESAPGIIVASGTI
GPELTANNVSIFITSDAGNTWREVFEEEYSILFLNQGGALVAIRHTPLPIRHIWLSFDEG
RHWKKFSFTSSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEWQLVKIDFRPIFNRRCTTDD
YQTWQLHNDGKVCIMGVKRIFQNLKPDARCVKTKDQYISHMSDSCPCTEADFECDYGFER
QSDGGCTAAFWFVPSSVSRDCTTGDSFLNTTGYRKALSNNCTVGTLGKYRLRRQRCPHQA
PRGLQLVTSEGTLTATLEDNVTFLVFLEEGDGSTTSITVDFGDGTAISYANISSIEDGVK
HTYSKVGIYQVAAMALNSLGSERVLLYLHVTCTLEQVQLSAPSVVVRNKAVNLSTVLKPS
YVGTVTYYWWFNNHTEPVVTLVGGMSFTFYKEGTHTVTVQVSVGNTVLQDKITVAVYEYF
RSHVLAFSSNLDAFNPAVAEWRQDISRVVKDSMVQVTGINGEQLLVSVLPGLPTAAELFI
IPEKRSTEGTMNRKGTHLEQLSQVLLSALNQDLIQFTLRPGVQVNVYPTRPSPAPLVDTS
ESGHNGAAVIMLVSVVFVGLAVFVIYKFKRKIPGINIYTEERSEKQQEVIPTVASIAVPN
PEGDMVTSLEHLDTGPDARGIGYLPSLTDIKLSDETPHVF
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgccgccacctgccaccctcaataaagtaaccgtcaataacactagacataatacaatt
aatagttttggaagagaaaatagacttaaaagacatgagttatcaaaaaacaaggctggg
tcaagtttgaggaaccttcgccgtcgacgaaagcgcagcttccaaacggcggagagcaaa
acatcttggtccggattccgatggaacagtgaagatgcgtcaacctccgggcaacatgag
ttgaaactcagtagttctacattcgcactcacgggggattcagctcataaccaagccatg
gtgcattggtccggccaaaatagcagcgtgattctaatgctgacgaagtactttgacttc
agccttggcagtgtcacagagagctctctatggaggtcaacagactatggaaccacgtat
gagaaacttgatgaaaaggtcgggccaaaaaccatactaagctacttgtacgtgagtccg
aataacaaacgaaagatcatgttactgaccgaccctgaggtggagagcagcctgctcatt
agctttgacgagggcgcatcctatcagaggtaccacttagccttcgacatcctcagcctc
ctcttccaccccgagcaggaggactggatcctggcttacagccacgaccagaagctctac
gtctctgttgaatttggaagacgatggcagctcgtacatgacagtgtggtccccaacaga
ttttactggtcaaaactgggtttggacaaagaaccaggaatgattcacttggagacaagt
gtttctgacagacgatcccagtatataacatgtaagctgcagaactgcacagaggccaac
aaaggcaggcctttccctgggtttatcagcccggattccctggtggttcaggaccagtat
gtattcattcaggtaccaatgggtggccggcctgtccattatgtgtcatacaaaagaaat
gctttcttccccatgaagctacctaagtacacatttccaaaggacttgcagataatcagc
acagatgataaccaggtggtggcagcagtgcaggattggcaccagaatgactcctacaac
ttgtacatgtcagaggcccgcggtctcttcttcactctggccctggagaacgtagtgagc
agtgggggaccagagggcaacgttatgatagacctctatgaggtagcagggataaaaggg
gtgttcttgtcaaataaagttgtcgagaacgaagtgaaaacatttatcacttacaataag
gggcgagactggcgtcttctacatgctcctaccactgatctgagcggtaccagactctac
tgtgtacagccctattgttcattgcacctgcatctccatgtgtctgacaacccgtacact
tctggaaacatagtcagcaaagaatcagctccaggaattatagtggcatcaggtaccatt
gggcctgagctgaccgccaataatgtcagcattttcatcacctcagatgctggcaacact
tggagagaggtatttgaggaggagtatagcatcctctttcttaaccagggcggtgcccta
gtggccattcgacacacacctctccccatcagacacatttggttgagttttgatgaggga
agacactggaagaaattcagctttacctcctctcctctctatgtagacggagtcttagga
gagccaggggaggacaccctcatcatgacaatatttggccatttcagccatcgttctgaa
tggcagctcgtcaagattgacttcaggcccatcttcaacagaaggtgcaccacagacgac
tatcagacctggcagttacacaatgacggtaaagtctgcatcatgggagtgaagagaatc
ttccagaatctgaagcccgacgccagatgtgtcaaaaccaaagatcagtacatctcccat
atgtcagactcctgtccatgcactgaggctgactttgagtgtgattatggctttgagagg
cagagtgatggaggatgcactgctgccttctggtttgttccatcctccgtgtccagagac
tgcaccaccggggacagcttcctaaacactacaggataccgtaaggctctgtccaataac
tgcactgtgggaacccttgggaagtaccgccttaggagacagaggtgtccccaccaggcc
cccagaggtctgcagctggtcaccagtgagggaacactcacagccaccctggaggacaac
gtgaccttcctggtgtttctggaggagggtgatggctccacaacaagtataacagtggac
tttggagatgggacggccatatcctacgctaacatcagctccatagaagatggggtcaaa
catacctacagtaaagtcggcatttaccaagtggctgccatggcactcaacagcctgggc
tctgagagagtcttactatacctacatgttacctgtacacttgagcaagtgcagctttca
gctccctctgtggttgttaggaataaagcagtgaatctgtcaacagtcctaaagccaagt
tacgttggaacagtcacctactactggtggttcaacaaccacaccgagcctgtcgtgact
ttagtgggaggaatgtccttcaccttctacaaggagggaactcatactgtcactgtgcaa
gtgtcagtaggcaacaccgtccttcaagacaaaataactgttgcagtctatgaatatttc
cggtcacacgttttagcattctcctctaatctggacgccttcaatcctgctgtggctgaa
tggagacaggacatcagtagagtggtcaaggactccatggtccaagtcacagggatcaat
ggagagcagcttctggtgtcagtgctcccagggttgccaacagcagcagagttgtttatc
atcccagagaaaaggtcaacagaggggacgatgaatagaaaagggacacatttagagcag
ctttctcaggtcctgctaagtgccctgaaccaagacctcatccagtttactctgcggccc
ggggttcaggttaacgtttaccccacacgaccgtctccagctcctctcgtggacaccagt
gagagtgggcacaatggtgctgcagtcattatgctagtgtctgtagtatttgtgggtttg
gcagttttcgttatctacaagttcaaaaggaagatccctggcatcaacatatacacagag
gagaggtcagagaaacaacaggaagtgatccctacggtggcgtccatagctgtcccaaat
cctgagggagacatggtgacctctttggagcacttggacacagggccagatgcacgtggc
ataggatacctgccatctctcactgacatcaaactctcagatgaaactccccatgtgttt
taa
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