Salvelinus namaycush (lake trout): 120020369
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Entry
120020369 CDS
T07522
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120020369
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120020369
04261 Adrenergic signaling in cardiomyocytes
120020369
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120020369
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120020369
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GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_2
dCache_1
Cache_3-Cache_2
dCache_2
Motif
Other DBs
NCBI-GeneID:
120020369
NCBI-ProteinID:
XP_038819900
UniProt:
A0A8U0P7T4
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Position
Sna2:10786825..11085213
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AA seq
1120 aa
AA seq
DB search
MAICAQSYGIFCLFSIQTILIISLSSPATGSLRFPQHYTMMHWAGRIEKELEKTIQLVTG
TQQIRGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTDFPW
LDSIKESDMEYYDSKAESDYTEDGDGEENLMENPYSMKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSATGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKLMKTSVMEMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQANMRNKKIFKESIMHMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKQVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTFAIDQNGYLLLHPNLQPKIIN
FREPVTLDFLDAELEDSKKEEIRREMIDGKSGQKKIKTLIKSVDERYIDEAMRTYTWTPV
EGTDYSLGLVLPTYSENHIKANLSDQILQVQYNLPLSVADFESLLPNSFESEGHVFIAPR
EYCNELELSNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWKTKD
LNTYGFLAVFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTVN
DELLNPENDTIGILVSTAVEITVGGKTIKPVVVGVKLDLEAWVDKFKILASNQTSPTSDN
RQVQQTCGPTSGCEMDCEANSEDLLCYLVDDGGFLIMSNQKDYWNKIGMFFSEVDPYLMH
ALYNNSFYNRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWSSAAAWSLFQQ
LLYGMAYHSWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNCSRLIHAK
RLNNTNLLFVVAEKMPCNTCEVEKLSQAETEFKEDNPSCEDMSAARYRKGPAVCYDYNLS
ENTSDCGRGHSFRPSLQTLLMIQLFLLYPIASPHILPLLL
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtatattctgtctgttctcaatccaaactatcctc
atcatcagtttatcttcgccggcaacggggagcctccgctttccccaacactacacaatg
atgcattgggcaggccgcattgagaaggagctggagaagactatacagttggtcactgga
acccagcagataagagggatttacaatgagaagaagagtcagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagcaag
aggagagccctggagaggctggccagggaggcggagcagctgcagacagattttccctgg
ctggacagtatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggacggagatggggaagagaacctgatggagaacccctactccatgaagctggag
tttgtggacgatcccaactttaaaaacaaggtcaactactcctacagtgccgtccagatc
cccacagacatctataagggctcaccagtcatcctgaatgagctgaactggacccaggct
ctggagagggttttcattgataaccgccgggaggacagctctctgcgctggcaggtgttc
ggcagcgccacgggggtcacaagatattacccagccactccatggagagcacccaataag
attgacctgtatgacgtccgcaggcggccatggtatatccaaggggcatcatctcccaag
gacatgatcatcatcgtggacgtgagtggcagtgtcagtggactcactctgaaactgatg
aagacgtcggtcatggagatgctagacactctgtcagatgacgactatgtgaatgtagcc
aggtttaacgagaaggctgatgctgtcgtcccctgttttaagaccttggtccaggccaac
atgagaaacaagaagatcttcaaggagtctatcatgcacatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgccttcgaacagctactcaatgataccggcgccccg
agggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgcacag
gacatctttgagaagtacaactggcccaacaaaacaattcgagtatttaccttttcagtc
gggcagcacaactatgatgtcacccccttgcagtggatagcttgtgccaacaaaggattc
tactacgagattccatccattggagccatcagaattaacacgcaggagtacctggatgtg
ctgggtcggcccatggtgctggctgggcccaaggccaagcaggtccaatggaccaacgtc
taccaggatgctctgggtctgggtctggtcataactgggaccatgccagtcttcaacctc
accgctgatgcaaactctcagacgcagcttgtccttggtgtcatgggagtggatgttgca
atcaacgaaattaagaggaagacaccaacatacaggcttggagccaatggatacaccttt
gcgatcgaccaaaatggctatttgctcctgcaccccaacctgcaacctaagatcattaac
ttcagagaacctgtcaccctggacttcctggatgctgagctagaggacagtaaaaaggag
gagatccgtcgagaaatgattgatggcaaatcagggcaaaagaaaatcaagactctcatt
aagtcagttgatgagaggtacattgatgaggccatgcggacatacacctggacaccagtg
gagggcacagattacagtctagggctggtactgcccacatacagtgagaaccacatcaag
gctaacctgagtgaccagatcctgcaggtgcagtataatcttcccctttctgttgcagat
tttgaatctctgctgccaaacagttttgagtctgaaggacatgtattcatagctcccagg
gaatactgcaacgagctagagctctccaacaacaacactgagttcctgctcaacttcatc
gctctcatggagaaggtgacacctgactccaaacaatgtgacaacctgctccttcataac
ctcatcctggacactggcatcatcagacagctggtggagaaggtgtggaagaccaaagac
ctcaacacatatggctttctggcggtgtttgctgcaacagatggagggattacaagagtg
tttcccaacaaggctgctgagacctgggaagaggaccctgagccttttaatgccagctat
taccgccgcagtctggacaacaagggctacatcttcagagcgccttatcgcaccgtgaat
gatgagctgctgaacccagagaacgacaccataggaatcctggtcagcactgcagtggag
atcacagtgggagggaaaaccatcaaacctgtagtggttggagtaaagctggatcttgag
gcctgggtggacaaattcaagatcctggctagcaaccaaacaagtccaacaagtgacaac
cgccaagtccaacaaacgtgtggaccaaccagtggctgtgagatggactgtgaagccaac
agcgaagaccttctttgttacctggtggatgacggtggtttcctgatcatgtccaatcag
aaggattactggaacaagattggcatgttcttcagtgaggtggacccctacctgatgcat
gctctctacaacaactccttttacaaccggaagcagtcctttgactaccagtctgtgtgt
gaccccgtgccaagcagcaacaccggggctgcaccaagaggagtctttgtgcccaccatt
gcagactttgtgaacctggcctggtggtcatcagcagctgcctggtccctatttcagcag
ctgctctatggaatggcctaccacagttggtttgtcacagatgaggtagaagcagagggg
atggactccagagagaccagctgtgtgacgatacagactcagttctacttcactaacatc
aacagctcctatgacatcctgcaagactgtggcaactgctccaggctgatccatgccaag
aggttaaacaacaccaacctcctgtttgtggtggcagagaagatgccctgcaacacctgt
gaggtggagaaactgtcccaggcggagacagagttcaaggaggataacccatcatgtgag
gacatgagtgcagcgaggtatcgaaaagggcccgctgtgtgctacgactacaatctttct
gagaacacatcagactgtgggcggggccactccttccgcccctcactccagaccctgctc
atgattcagctcttcctcctctatccaatcgccagcccccatattctgccccttttactt
taa
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