Salvelinus namaycush (lake trout): 120020927
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Entry
120020927 CDS
T07522
Name
(RefSeq) beta-hexosaminidase subunit beta-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00511
Other glycan degradation
snh00513
Various types of N-glycan biosynthesis
snh00520
Amino sugar and nucleotide sugar metabolism
snh00531
Glycosaminoglycan degradation
snh00600
Sphingolipid metabolism
snh00603
Glycosphingolipid biosynthesis - globo and isoglobo series
snh00604
Glycosphingolipid biosynthesis - ganglio series
snh01100
Metabolic pathways
snh04142
Lysosome
Module
snh_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
120020927
09103 Lipid metabolism
00600 Sphingolipid metabolism
120020927
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
120020927
00531 Glycosaminoglycan degradation
120020927
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120020927
00604 Glycosphingolipid biosynthesis - ganglio series
120020927
00511 Other glycan degradation
120020927
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120020927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
snh03110
]
120020927
Enzymes [BR:
snh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
120020927
Chaperones and folding catalysts [BR:
snh03110
]
Intramolecular chaperones
Others
120020927
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
DUF4248
Peptidase_C57
Motif
Other DBs
NCBI-GeneID:
120020927
NCBI-ProteinID:
XP_038820494
UniProt:
A0A8U0TKX5
LinkDB
All DBs
Position
Sna26:6338565..6349239
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AA seq
547 aa
AA seq
DB search
MIATLKCTTLLLAVVVCRATQDYGYNDVEEPTLGDSQYGSLWPLPQKVKMSTVAFKLSGA
SFQIVDAKESSSGASCSLLQNAYRRYDEYIFPISRMQGQNKKKAFASDVSELQVWITSAD
SECDSYPSVTSDESYELSVDSPVAVLKAPKVWGALRGLETFSQLVYEDEYGAKSINRTEI
QDFPRFAHRGLLLDSSRHFLPIKVILANLEAMAWNKFNVFHWHIVDDQSFPYMSRTFPQL
SQQGAYHPYTHVYTPSDVKMIIEFARLRGIRVVSEFDTPGHTQSWGKGQKDLLTPCYSGA
SPSGSFGPVNPILNTTYDFMAMFFKEVSTVFPDAYIHLGGDEVDFSCWKSNPDIQKFMAQ
QGFGTDYSKLESFYIQRLLDIVTTTNKGYMIWQEVIDNGVKLKADTLIHVWKGNQQQYQA
EMARVTASGYQALLSTPWYLNRISYGQDWQAAYKADPQDFNGTDAQKKLVVGGEACLWGE
YVDATNLTPRLWPRASAVGERLWSGKEVKDINDAYSRLIQHRCRMVQRGIPAEPLFTGYC
AHEYKGV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgacgctgaagtgtacaacattattacttgctgttgttgtctgccgggcaacg
caagattatggttataatgatgtcgaggagcctactctgggcgattctcagtatggatct
ctctggccgttgcctcagaaagtcaaaatgtcaacggtagcattcaaactcagcggtgct
agtttccagatagttgacgcgaaagaatcgtcttccggtgcgagctgcagccttcttcaa
aatgcatatcgaaggtatgacgaatacatattccccatttccagaatgcaagggcaaaac
aaaaagaaggcatttgcctctgatgtgtctgagttacaggtgtggatcacatcagctgac
tcagagtgtgacagctaccccagtgtgacatctgacgaatcatacgaactctcggtggac
tctcctgttgctgtgctgaaagcacctaaggtgtggggcgcgctgagaggtctggagact
tttagccagttggtgtatgaggatgaatatggagcaaaaagcatcaataggacagagatt
caggactttccacggtttgcacatcgaggcctcttattggacagctctcgtcacttcctg
cccatcaaagtcatcttagccaatctggaagcaatggcctggaacaaattcaatgtgttc
cactggcacatagtagatgaccaatccttcccctacatgagccgtaccttcccccagctg
agccagcagggagcataccacccgtacacgcatgtgtacacgccctctgacgtgaagatg
atcattgagtttgctcgcctcaggggcattcgtgtcgtctctgagttcgacacccctgga
cacactcagtcatggggcaaaggccagaaggacctactgaccccctgttactctggagcc
agcccctctggctcgtttggaccggtcaaccctatcctcaacaccacctatgacttcatg
gccatgttcttcaaggaggtcagcacagtgttccctgatgcctacatccatctaggagga
gacgaggttgacttcagctgctggaagtccaacccagacatccagaagttcatggcgcag
caaggctttgggaccgactacagcaagctggagtctttctacattcagaggctcttggat
attgtcaccactactaacaagggctacatgatctggcaggaggtgattgacaatggagtt
aagctgaaggctgacacgctaatccacgtgtggaaaggcaaccagcagcagtaccaggct
gagatggcaagggtcacagcatcaggctatcaggccctgctctccacaccctggtacctg
aaccgcatctcctacggccaagactggcaggccgcttacaaggcagacccacaggacttt
aatggcacagatgctcagaagaagctggtggtcgggggagaggcctgtctgtggggggaa
tacgtggacgctaccaacctgacccccagactctggccccgtgccagtgctgtgggggag
cggttgtggagtggcaaggaggtgaaagacataaacgatgcttatagtcgtctgatccag
caccgctgtcgcatggtccagcgtggtataccagctgagcctctgtttacaggttactgt
gcacatgagtacaaaggggtatga
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