KEGG   Salvelinus namaycush (lake trout): 120021395
Entry
120021395         CDS       T07522                                 
Name
(RefSeq) interleukin-1 beta-like
  KO
K04519  interleukin 1 beta
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04010  MAPK signaling pathway
snh04060  Cytokine-cytokine receptor interaction
snh04217  Necroptosis
snh04620  Toll-like receptor signaling pathway
snh04621  NOD-like receptor signaling pathway
snh04623  Cytosolic DNA-sensing pathway
snh04625  C-type lectin receptor signaling pathway
snh05132  Salmonella infection
snh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    120021395
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    120021395
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    120021395
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    120021395
   04621 NOD-like receptor signaling pathway
    120021395
   04623 Cytosolic DNA-sensing pathway
    120021395
   04625 C-type lectin receptor signaling pathway
    120021395
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120021395
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120021395
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:snh04052]
    120021395
   00536 Glycosaminoglycan binding proteins [BR:snh00536]
    120021395
Cytokines and neuropeptides [BR:snh04052]
 Cytokines
  Interleukins
   120021395
Glycosaminoglycan binding proteins [BR:snh00536]
 Heparan sulfate / Heparin
  Cytokines
   120021395
SSDB
Motif
Pfam: IL1
Other DBs
NCBI-GeneID: 120021395
NCBI-ProteinID: XP_038821079
UniProt: A0A8U0TLH2
LinkDB
Position
Sna26:complement(4718688..4724309)
AA seq 280 aa
MDFDLADALPSSYSSMEFDTEYRPPDAKSGPETERCGLHADLSLDLEVILQHRGGMRQVA
HLVIALHRMKNPFRKSDSTHTSLDVECTDEQFCSIIMDNLVEECVMVPIQGPMGTVAKKE
KGTFEQIGNPEQYSLCDRHQKSLVYCHRTMDLKAVTIRGGNNRRARFNLSRYSNASTTTN
QALPVVLGIDQWNLSCSKQADSATPVLQLERCEDQLTTIGAQEETVRFLFYKNTTGFSLT
TFESAMYPGWFISTSLEPSQPIEMCQKQDARKLMNFMVRN
NT seq 843 nt   +upstreamnt  +downstreamnt
atggacttcgatttagctgacgctctgccgagctcatattcgagtatggagtttgatacc
gaataccgcccgcctgatgcgaagagtggaccagagacggagcgctgtgggctgcacgcg
gacctgagcctcgacttggaggttatcctacagcatcggggaggcatgagacaggtggct
cacctggtgattgcgctgcatagaatgaaaaaccccttccggaagtccgactccacacac
acttccctagacgtggagtgcaccgacgagcagttttgcagcatcatcatggataacctg
gtggaagagtgtgtgatggtcccgatccaggggccaatgggaacggtggccaaaaaggaa
aaggggaccttcgagcagattggcaaccccgagcagtatagcctgtgtgaccgtcaccag
aagagcctggtgtactgccacagaaccatggatctgaaggccgtcacaatccggggaggc
aacaaccggagagcgaggttcaacctctccaggtatagtaatgccagcaccaccaccaat
caggccctgccagttgtcttagggatagaccaatggaacctctcctgctccaagcaggca
gacagcgcaactcctgtcctacagttggagcgctgtgaggaccagttaacaaccatcggg
gctcaagaagaaacagttcgcttcctcttctacaagaataccactggcttctccctgacc
acctttgagtcggcaatgtaccccggctggttcatcagcacctcactggagccaagccag
cccatagaaatgtgtcagaaacaggacgccagaaagctcatgaacttcatggtcagaaac
taa

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