Salvelinus namaycush (lake trout): 120022313
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Entry
120022313 CDS
T07522
Name
(RefSeq) teashirt homolog 1-like
KO
K09236
teashirt
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120022313
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120022313
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_4
zf-C2H2
zf-met
Zap1_zf1
zf-C2H2_6
Homeobox_KN
DUF760
Motif
Other DBs
NCBI-GeneID:
120022313
NCBI-ProteinID:
XP_038822140
UniProt:
A0A8U0TN41
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Position
Sna27:27091410..27095311
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AA seq
1150 aa
AA seq
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MSCLMSLFSLILCFSAYGDEDEFKADDKIDEEHLQDDGLSLDGQDGEYLCNEDDDAGDQF
SFQNSPFSNGTNPDAGYASPLSDTSDQLTDFQSTRSKDGLDKEEAVRGGEDHLKIPNGLS
LQDSLAQMKAVYANLISDASWSSITKDMLRSNSNSNKVISVISNSNGSSHKGSNGIANSN
TIRLVNNNNHTNSSSNTSAPTNTTSNTTARSTANTNNNGTGVSTGSTGGVTYDWHQAALA
KTLQHTPYNLLPEPSLFSTVQLYRQHNKLYGPVFTGASKFRCKDCSGAYDTLVGLTVHMN
ESGHYRDDNKDKEEERGKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM
IKTKHYQKVPLKEPMPALTSKLVPPTRKRAFHDLVSPCSPESVHNTPGVHLGETTKDQKV
VNPYVTANNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVT
NTASKKGKQLVFDPLVEEKIQSIPLPPTSTRLPAPNVKSQPDSPLLHSSHTEEKREEHEK
MEMSEPENKIKEEKEDLTEKSEKAGKAGHYKYLTEEDLEETPKGGLDILKSLEFTVSSAI
SKAQTGTPTWGGAGYPSIHAAYQLQGSLKSSMQSVQVVQPLFSTSSLKVMASDSSNLIHS
PVSHSPPPRHKNNVLAMEELVEKVTGKVSVKKEKDEKASENKCKVSSTKSSSPLSKERKG
SPMPDSFNNPVKNIDVEDKSEPRSREGEAKDSKADPPMKNGTDVPKTVVGNGCNSLGIIT
DHSPEQSFVNPLSALQSIMNNHLGKASKTATPFLDPLAMLYKISNNMLEKPMNNSNQVKQ
VESINRFYDNDDQPMDLTKSKNTNGRTANSTSTTPNNNNNCNTNNSNRPILSSLSESLSS
PLRENALMDISDMVKNLTGRLTPKSSTPSSISEKSDADNSAFEDGLEELSAFQKRKGRQS
NWNPQHLLILQAQFTSCLQETSDGKFVMTDLGPQERVHICKFTGLSMTTISHWLANVKYQ
LRRTGGTKFLKNIDSGQTLFLCSDCASQFRTPSSYINHLESHLGFSMKDISKLSIDHLRE
QQAVTRMITEKTFSSLGLNEEDSCSVFQCKLCNRTFVSKHAVKLHLSKTHGKSPEDHLIF
VTELEKFDKA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagttgcctgatgtcccttttttctctcatcttgtgtttctcagcttatggggacgag
gacgagtttaaggctgatgacaagatcgatgaggagcacctgcaagatgatgggctctcc
ttggatggacaggacggcgagtacctctgcaacgaggatgacgatgccggggaccaattc
agcttccagaactccccgttcagcaatggcaccaaccccgacgccggctacgcctctcct
ctcagcgataccagcgaccagcttaccgacttccagagcactcgctccaaggacggactg
gataaggaggaggcagtcagaggaggagaagaccacctaaagatccccaatggcctgtct
ctgcaggacagcctggcgcagatgaaagccgtctatgcaaacctgatctcggacgcctct
tggtccagcatcaccaaggacatgctaagaagtaacagcaacagcaacaaggtcatcagt
gtgatcagcaacagcaatggaagcagccacaaggggagcaacggtatcgccaacagtaat
actatcagacttgtgaacaataataaccacaccaacagcagcagcaacacctctgcccct
accaacactaccagcaacactaccgctagaagcaccgctaacactaacaacaatggcact
ggtgtcagcactggcagcaccggtggagtgacctatgactggcaccaagcggctttggcc
aaaaccctgcagcatacaccatataacctcctccccgagccgagcctcttcagcactgtg
cagctgtaccggcagcacaacaagctctacggcccggtgttcaccggtgccagcaagttc
cggtgcaaggactgcagcggagcctatgacacgctggtggggctcacggtacacatgaat
gagtcaggccactaccgtgatgacaacaaggacaaggaggaggaacggggaaagaggtgg
tccaagccacgtaagcgctccctcatggagatggaaggcaaggaggacgctcaaaaggtt
ctcaagtgcatgtactgcggccactcctttgaatccctgcaggacctgagcgtccacatg
atcaaaacaaaacactaccagaaagtgcctctcaaagaacccatgccagccctcacctca
aagctggtgccacctaccagaaaaagagcatttcatgacttggtgtccccgtgctctcca
gagtctgtccacaacacacctggtgtacacctcggggagaccacgaaagaccagaaagtg
gttaacccctatgtcacagcgaataaccgctacggctaccaaaatggcgccagttacacc
tggcagtttgaggctcgcaaggcccagatcctcaaatgcatggagtgcgggagttcccac
gacaccctgcaacaactgacagcccacatgatggtcacaggacactttttgaaagtgacc
aacacagcgtccaaaaaggggaagcagttggtgtttgaccccctggttgaggaaaagata
cagtccattcctctcccgccgacctctacacgactgcctgctcccaatgtgaagtcacag
cccgattctcctctcctgcactcctcccacactgaagagaaaagggaggaacatgagaaa
atggagatgagtgaaccagagaataagatcaaagaagagaaagaggatctgactgagaaa
agtgagaaagctggcaaggctggacattacaagtatctcacagaggaagacctggaagag
actcccaaaggaggtctggatatcctgaagtccttagagttcacagtgtcaagtgcaatc
agcaaggcccagactgggacgcccacctggggtggtgctggctaccctagcatccacgct
gcctaccagctccaggggtctctgaagtcctcaatgcagagtgtccaggtggttcaaccc
ttgttcagcactagcagcttgaaggtgatggcctctgactccagcaatctgatccattca
ccggtcagtcattccccacctccaagacacaagaacaatgtgcttgccatggaggagctg
gtggaaaaagtcacagggaaggtctctgtgaagaaggagaaggacgagaaggcctcagaa
aataaatgcaaagtgagctctaccaagtcatcgtccccactgtccaaggagaggaagggg
tcacccatgccggatagcttcaacaatccggtgaaaaacattgatgtagaggataagagc
gagcctagaagcagagagggagaggcaaaagacagcaaagcggatccgccaatgaagaac
ggaacagatgtgccaaaaacggtagtcggcaatggctgtaacagcttgggaatcatcacg
gatcattcacctgagcagtcttttgtcaaccctctcagtgcgttgcagtccatcatgaac
aatcacttgggaaaggcctcaaagacagccaccccctttctagatcctctggcaatgctg
tacaagatcagtaacaacatgttggagaagcccatgaacaactccaatcaggtcaagcaa
gttgagtcaatcaatcgattctatgacaatgatgaccagcccatggacttgacaaaatcc
aaaaacacgaatggacgtaccgctaacagcacctccactacgccgaacaacaataacaac
tgtaataccaataacagcaacaggcctattctctcaagcttgtctgaatctctctcgtcc
cctttacgggaaaatgctttgatggacatctccgacatggtcaagaacctgaccggccgt
ctgacaccgaaatcgtccaccccatcctccatctctgagaaatctgacgcggacaacagc
gccttcgaggatggcttggaggagctctctgcattccagaaaaggaaaggccggcagtcc
aactggaatccccagcacctcctcatccttcaggcccagtttacctcctgtctccaggag
acgtctgacggcaagttcgtcatgactgacctcggcccccaggagcgggtccatatctgc
aagttcactggtctctccatgaccacgatctcccattggctggccaatgtcaagtaccag
ctgaggcggacaggcgggacaaaattcctgaaaaacattgactcgggccagaccctgttt
ctgtgcagtgactgtgcctctcagtttaggactccttcctcttacataaaccatttggag
tcccacttaggcttcagcatgaaggacatctcaaagctttccatagatcaccttagagag
cagcaggcagttaccagaatgataacggagaaaacgttcagttccctgggacttaatgag
gaagactcatgctctgtatttcagtgcaagctgtgcaatcggacctttgtcagcaagcat
gcagtcaaactgcaccttagcaaaacgcatggcaagtctccggaggaccatctgatcttt
gtcactgaactagaaaagtttgataaagcataa
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