Salvelinus namaycush (lake trout): 120024359
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Entry
120024359 CDS
T07522
Name
(RefSeq) laminin subunit alpha-4-like
KO
K06241
laminin, alpha 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120024359
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120024359
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GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_EGF
Laminin_II
Laminin_I
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120024359
NCBI-ProteinID:
XP_038824511
UniProt:
A0A8U0PHC3
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Position
Sna29:complement(23926526..23964357)
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AA seq
1881 aa
AA seq
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MSATKALPCLCLLLSIVLSGIVCPATSIGLHWEQQSVMKVCAKLYFLSNQKKCLPCNCKG
HSETCEDITGVCTSCQDHTTGDFCEICEDGYMPDVSNHGRHSCQPCACPLSSPSNNFAEH
CDRSSNILRCNCQEGYAGHYCERCAPGFYGNPMVIGDSCKSCDCNGNSDPNHIFNECHNV
TGFCQNCWGDTAGANCERCAPGFYGDAISAKNCRVCECNKCGTASCDDRTGTCHCKPGVT
GQICDQCEEGHTGFNNCQGCHSCDCGPAGLRPTCHPLTHSCQCKPGAGGRYCERCLPDYW
NYGPSGCQKCNCASSHCDVHTGECLPESTTVNLCNISCDECIWHLIGDLRPSNKTLDQIK
VSVLNISTGAAANDRIKYYNYTAQRLQTQFVNWRNKSALMRIQTGQLEEASAVLLLDINH
LAETESVVKSLGDRVDDDTLQSVTLADELTTNLTALNVLIEEMISDWEMYSVHQDLDPEI
IRQKTAVAEGMVAWMKKLDLSPKEPIATDESIEAHDLLRRMRQLEKKLISTDSRMAPVRE
VLSRFTNKLSEAQEILQKAANTVQETEDMNKANTVKFQRSEAKQQELIENYEAVNDTLQM
AKDLIMDTENTVAEMHLLVQNVTEYHAAIDGASKGLQEKTEVLPLADRDLVQRAQDHAED
LQSQADELEYNLKCSDANGFVQKALDTANVYNNIVQYIEEANITGLTTMDLATRAEDASG
GINTQMGFLKTQSENVLKESVSLRSEQFEVEAEVLDKMKYIEETKETMDDNTKKLAVVLK
DIKGIEPGRTTKRLELTKEVAEGTLNRSVEVLQTITPIHEKVEEWATNMKNQDYSAAAFD
HAVVSAGEAVENLSELVPELLDKLRVVEEKNQVNNVTTNIMRIRELIAQARSVAKKVQVS
MKFNGQSSVQVQPHTNLEDLKTVTTISMFIRVDPDKDPIEDRFIFYLGDRNGRKDYMGLA
IKNDNLVYVYKLGEEDVEIPLGSKPVSQWPPVFNLIKVERLGRHGKVFLTVPSQTSTDEQ
KFIQKGEAFGTDSLFDLDPKDTVFFVGGVPADVRLPPALSLAPFVGCIELASLNNDVISM
YNFKQTHKMDVVASTPCPRYKLAFSQSRIASYLFDGTGYALINNMERRGKFGIVTRFDIA
VRTVANNGILLLMVTGDNFFLLELKNGFLRLMYDFGFSGGPIVMESNSPKLQINDARYHE
VSVIYHYSKKFILLVDKSHVKSMENEKKTLPFSDIYIGGAPSHILLSRPELSSLVGLKGC
VKGFQFQKKDFNLLEEPGTIGISSGCPEEYFMSRKAYFTGESYLGSAAKISPFNTFEGGL
NFRTLQPTGLLFYHSEGSDEFTITLENGAVVLNSRGTRVKSQKKQYNDGITHFLVASVNN
DKYELVVDDKDKHEKKRPTAAPSASTVRNFYFGGSPSSSIKNFTGCISYAYISRQDRDIE
PEDFQKYTENVQTSLQDCPVKRPPAALFSKQSKNSAKPKQGHTRKVGRDKSNLPKGLLGL
NSDDQEPGETEETPCYLSPRPRATRHAHHYGGTANSRQEFTDIPGSLSKKSHFSLSLKTQ
SSFGLIFYVSDEAEDNFMALFLAHGKLVYTFNLGQQRVKIKSLEKYNDGAWHNVIFIRDG
NLGRLVIDGLTVLEDRAQGSNVSWHIRSHLYLGGVPPGRAQRNIQRNSAYSFTGCVKNLQ
LNGQWLSSVSQTFGVTPCFEGLSEPGTYFSEEGGYVVLDDTFNLGLKFELVVEVRPRVAS
GVLLHVYTAAEEYLTMYIHQGAVVVLVNNGVREFFTQVTPRLGLCDGSWHRITVIRDANV
VQLDVDSEVNHVVGPLNPSTQSARTPVFIGGAPESLLPEGIATRRAYTGCMRKLTVNESQ
VSFSKAALVSGAVSVGSCPAA
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctactaaagctctgccctgcctctgccttctactctccatcgtcctctcaggg
atcgtctgcccagcgacttccattggtttacattgggaacagcagtccgtgatgaaagtg
tgtgcaaaactatatttcctcagtaaccagaaaaaatgcctaccatgtaactgcaaaggc
cattcagaaacatgtgaagatatcacaggtgtttgtacatcatgtcaggaccacaccact
ggggatttctgtgaaatatgtgaggatggatacatgcctgacgtctccaaccacggacgt
cactcctgccagccgtgtgcctgtcccctgtccagcccctccaacaactttgcagagcac
tgtgacagaagcagtaacatcctacgatgcaactgccaagagggctacgctggacattac
tgtgagagatgtgctccaggtttctatggcaaccccatggtgatcggtgactcctgtaag
agttgtgactgtaacggtaactcggaccccaaccacatcttcaatgagtgccacaacgtg
accggcttctgtcagaattgctggggggacacggccggagccaactgtgaacggtgtgcc
ccaggtttctacggcgacgccatcagtgccaagaactgcagagtctgtgagtgcaataag
tgtgggacagcttcgtgtgatgacaggacagggacatgtcactgtaagcctggtgtcacc
ggccaaatctgtgaccaatgtgaggagggccacacaggtttcaataactgccagggctgc
catagttgtgactgtggacctgccggtctccggcccacctgtcatcctctgacccacagc
tgccagtgcaaaccaggggccggaggccgatactgcgagcgttgcctcccagactactgg
aactacggcccctcagggtgtcagaaatgtaactgtgctagcagccactgtgatgtgcac
actggggagtgtctccctgaatccaccacggtcaacctctgcaacatcagttgtgatgag
tgtatctggcacctgattggtgacctgaggccgtccaataagacgctggaccagataaag
gtcagtgtgttgaacatctccactggggctgcagccaacgataggatcaagtactacaac
tacaccgcccaacgtctgcagacacagtttgtgaactggaggaacaagtcagctctgatg
aggatccagactgggcagctggaggaggccagcgctgttctactcttagacattaaccat
cttgcagagacggagagtgtagtgaagtccttgggggacagagtggatgacgacacacta
cagagcgtcactctggctgatgagctgacaactaaccttaccgccctcaacgtgctgatt
gaagagatgatcagtgactgggagatgtacagtgtccatcaggatctggacccagagatc
atcagacagaagacagctgttgccgagggcatggtggcctggatgaagaaactggacctt
tccccaaaagagcccatcgccaccgatgagtcaatcgaggcccacgacctccttagacgc
atgcgtcagctggagaagaagctgatcagtacagacagccgcatggccccggtacgggag
gtactctcccgcttcaccaacaagctctctgaggcccaggagatcctccagaaggctgcc
aacactgtccaggagacggaagacatgaacaaagccaacaccgtcaaattccagaggagt
gaggccaagcagcaggagctgatagagaactacgaagctgtgaatgacaccttgcagatg
gctaaagaccttatcatggacactgaaaatactgtggccgagatgcatctcctggtgcag
aacgtgactgaataccacgctgcgatcgacggcgccagcaaggggctgcaggagaagact
gaggtgctgcccctggcagacagagacctggtccagagagcccaggaccacgcagaggac
ctccagagtcaagcggacgagctggagtataatctgaaatgcagtgatgccaacggcttc
gtgcagaaggctctggatacagccaatgtgtacaacaacatagtccagtacatcgaagag
gccaacatcactggactgacaacaatggatttagcaacaagagctgaggatgccagcggt
gggatcaacacccagatggggtttctgaagacccagagtgagaatgtcctcaaggaatct
gtttcattgcgctctgagcaattcgaggttgaagctgaggttctggacaagatgaaatac
attgaggagaccaaggagaccatggatgacaacaccaaaaaactagcggtagtactgaaa
gatatcaagggaattgagccaggcagaaccaccaagcgtctggagctcaccaaggaggtg
gctgaaggcaccctgaaccggtcagtggaggtcctgcagaccatcacccccatccacgag
aaggtagaggagtgggccaccaacatgaagaaccaagattactctgctgcagcctttgac
cacgctgtagtctctgctggggaagcagtggagaacctgtctgagctggtccctgaactg
ctggataagctgcgtgtggtggaggagaagaaccaagtgaacaatgtgaccactaacatc
atgaggatcagagagctcattgcccaggccaggagtgtggccaagaaggtccaagtgtcc
atgaagttcaacggtcagtcatcggttcaggtgcagccccacaccaacctggaggacctg
aagacagtgaccaccatcagcatgttcatcagggtggacccagataaggaccctatcgag
gaccgcttcatcttctatctgggagacagaaatggtaggaaggactacatgggtctggca
atcaagaatgacaacctggtgtacgtctacaaactgggagaggaagatgtcgagatccca
cttggttcaaagcctgtcagccaatggcctccagtcttcaacctcatcaaagtggagagg
ttgggcagacatggcaaagtgttcctgaccgtacccagtcagacatccacagacgagcag
aaattcatccagaagggagaggcctttggcaccgactccctgttcgacctggatcctaaa
gacactgtcttctttgtgggtggcgtccccgctgatgtcaggcttccacctgcactcagc
ctagctccttttgtgggctgcatcgagttggcctctttgaataacgatgtcatcagtatg
tacaatttcaaacagacccacaagatggatgtagttgcttcaacaccttgtcccaggtat
aagctggcattctcacagagtcgtatcgccagctacctgtttgacggaactggatatgcc
ctcatcaacaacatggagaggaggggtaaatttggcatcgtcacccggtttgacattgct
gttcggacagtagcaaacaacggcatcctgttactcatggtcaccggggacaacttcttc
ctgttggagttgaagaatggcttcctacgtctcatgtatgactttggcttcagtggaggc
ccgatcgtcatggagagtaactcacccaaactacaaatcaacgacgcaagataccatgag
gtgtcagtgatctatcattactccaagaagttcattctattggtggacaagagtcacgtg
aagtccatggagaacgagaaaaaaactctgcccttctctgatatctacataggaggagcc
ccctcgcacattctcctctccaggcctgagctatcctccctggttgggctgaagggctgt
gtgaagggcttccagttccagaagaaagactttaacctcctggaggaaccaggcactatt
ggcatcagcagcggttgtcctgaggagtactttatgtcccgtaaagcctatttcactgga
gagagctacctaggatctgcagcaaagatatctcctttcaacaccttcgagggaggcctt
aacttcaggacactgcagcctactggtctcctgttctaccacagcgaagggtctgatgag
tttaccatcacccttgagaatggagcagtggtattgaactccagaggcactagagtcaaa
tcacagaagaagcagtacaatgatggaattacccatttcctggtagcttcagtgaataat
gacaagtatgagttggtggtggatgacaaagacaagcatgagaagaaacgtccgactgct
gccccatcagcatccacagtgaggaacttctacttcggaggctctcccagcagcagcatc
aagaacttcactggctgcatcagctatgcctacatcagcagacaagacagagacattgag
ccagaggactttcagaagtacactgagaatgtccagacctctctgcaggactgtcctgtg
aagcgaccacccgctgccctgttctcaaagcaaagtaaaaactctgccaaacccaagcag
ggccatacaaggaaggtgggcagagataagtccaacctcccaaaaggcctgttgggactg
aatagtgatgaccaggagccaggagagacagaggagacgccctgctacctgtcccccagg
ccccgtgccacccgccatgcccatcactatgggggcactgccaacagcaggcaggaattc
acagacatcccagggtccctctctaagaagtctcacttctccctgtccctgaagacccag
tcctcctttggcctaatcttttatgtatcagatgaggcggaggacaacttcatggctctc
ttcctggcccatggcaagctggtgtacacattcaacctgggtcagcagagggtcaagatc
aagagcctggagaagtacaatgatggagcatggcacaatgttatttttatccgtgatggg
aatctaggccgattagtcattgatgggctgacagtgctggaggacagagctcagggctcc
aacgtttcctggcacatcagaagccacctctacttgggaggggtgcccccagggagggcc
cagaggaacatacagagaaactctgcatacagcttcactggctgtgtgaagaacctccag
ctgaatggccaatggctgtcctccgtgtcccagaccttcggggtgacgccgtgtttcgag
ggactctccgagccggggacatacttctccgaagagggtggatatgttgtcttggatgac
acgttcaacctggggctgaagtttgagctggtggtagaggtgcgcccccgtgtggcatca
ggggtgctactacatgtgtacacagcagccgaggagtacctcaccatgtatatccatcaa
ggagcagtggtggtgctagtgaacaacggagttcgtgagttcttcactcaggtcactcct
agactaggcctgtgtgatgggagctggcacaggatcacagtgattcgagatgccaatgtt
gtccagctggatgtggactcagaggtcaatcacgtggtgggaccacttaaccccagcacc
cagagtgccaggacccctgtgttcattggtggagctccagaatctcttcttccagagggc
attgcgactaggagggcctacacaggctgtatgaggaagctaactgtgaatgagagccaa
gtgagcttcagtaaagctgccctggtcagcggggccgtcagtgtgggctcctgtccagct
gcctaa
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