Salvelinus namaycush (lake trout): 120025746
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Entry
120025746 CDS
T07522
Name
(RefSeq) protein ERGIC-53-like
KO
K10080
lectin, mannose-binding 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120025746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120025746
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
snh04091
]
120025746
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120025746
Lectins [BR:
snh04091
]
L-type lectins
120025746
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
Laminin_I
GCN5L1
DUF5063
RebB
Motif
Other DBs
NCBI-GeneID:
120025746
NCBI-ProteinID:
XP_038826281
UniProt:
A0A8U0PKR7
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All DBs
Position
Sna31:46601882..46626930
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AA seq
509 aa
AA seq
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MAVSIGRCLAADACLLILTLTFHHSNADNIVAGASTEEAPHRRFEYKYSFKGPHLSQTDG
IIPFWVHSGNAIPSADQVRITPSLRSQKGSVWTKNTVNFDHWEAEVTFRVSGRGRMGADG
LAIWFTTAQGLDGPVYGAADNWNGIAVFFDSFDNDGKKNNPAVLVVGNNGKLVYDHPNDG
TTQALGTCLRDFRNKPYPVRAKITYYKKTLTVLINNGFTPDKDDYEFCTKVDNMIIPQEG
YFGISAATGGLADDHDVLSFLTFRLTEPGQELPAPEAEIPKEEQDKYQEEFENFQQELDK
KKEDYQKEHPEVQREPIEDMYESVNDRDIRQVFEGQSQIHLEIKQLHRQMAMILDEQNRY
VSVVTDEISKRQGELVGQAPSQEMGAVVATQQEILRNLNELKNSFHESLKQIGATQHQAN
PVSMGTYETVQHFSEIQEHLHVVKRNIEHLITRNGSPSENQGEKCPDPPKMPSCLGTTHF
LVFVVIQSVLFFSYIMYKSQQEAAAKKFF
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccataggaaggtgtctggctgctgatgcttgtttattaatattaacttta
acatttcaccacagtaatgccgataatatcgttgccggtgcatcgactgaagaagctcca
caccgtcgatttgaatacaagtacagtttcaagggaccgcacctgtctcaaaccgacggg
attattcctttttgggtgcacagtggaaatgccatccccagtgccgaccaggtccgtatc
accccctctctcaggagtcagaagggctcagtctggaccaaaaacacggtcaactttgac
cactgggaggctgaggtgacctttcgtgtatctggacgggggaggatgggagccgacggt
ctggcgatatggttcaccaccgcacaaggcctagatggtcctgtctatggagccgctgac
aactggaacggcatcgccgtcttctttgattcctttgacaacgatgggaagaaaaataac
cctgctgtgctggtggtgggaaacaatggcaaacttgtttatgatcacccaaatgatggc
acgactcaagccctgggaacatgcttaagagactttcgtaacaaaccctatcctgtcaga
gccaaaataacatactacaagaagacactaacggtgctgatcaacaatggtttcacgcca
gataaggatgactatgagttctgtaccaaggtggacaacatgatcattcctcaggagggc
tactttggcatctcagctgccacgggtggtctagcagatgaccatgatgtcctgtccttc
ttgacgttcagactaacagaacctggccaagaactgcctgcacctgaagcagagatcccc
aaggaggagcaggacaagtaccaggaggaatttgagaactttcagcaggagctggacaaa
aagaaagaggactatcagaaggagcatccggaagtccagagagaacccatcgaggacatg
tacgagagtgtcaacgacagggatatccgtcaggtgtttgagggtcagagccagatccac
ctggagatcaaacagcttcaccgtcagatggccatgatcctcgacgaacagaaccgctat
gtatctgtggttacagacgagatatccaaacgccaaggggagttggtgggacaggctcct
agtcaagaaatgggtgcagtggtcgcaacacaacaggagatactgagaaacctgaacgag
ttgaaaaactctttccatgagtctctgaagcagatcggcgccactcagcaccaagccaac
ccagtgagcatggggacatatgagacggtgcaacacttcagcgaaatccaggaacatcta
cacgtggtcaagaggaacatcgaacaccttatcacacgcaatgggagccccagtgaaaat
cagggagagaaatgccctgaccctcctaaaatgccttcctgtctgggtactactcacttc
ttggtctttgtggtcatccaatcagtcctgttcttcagctacatcatgtacaaaagtcaa
caagaagcagcagcaaagaaattcttttga
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