Salvelinus namaycush (lake trout): 120026896
Help
Entry
120026896 CDS
T07522
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain-like
KO
K06751
MHC class I antigen
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
snh04145
Phagosome
snh04218
Cellular senescence
snh04514
Cell adhesion molecules
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120026896
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120026896
04145 Phagosome
120026896
09143 Cell growth and death
04218 Cellular senescence
120026896
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120026896
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120026896
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120026896
Exosome [BR:
snh04147
]
Exosomal proteins
Proteins found in most exosomes
120026896
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Antigens
120026896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_2
Psg1
ig
MHC_I_3
DUF1616
TraL
Motif
Other DBs
NCBI-GeneID:
120026896
NCBI-ProteinID:
XP_038827557
UniProt:
A0A8U0PNR9
LinkDB
All DBs
Position
Sna32:8710279..8733733
Genome browser
AA seq
367 aa
AA seq
DB search
MKGFVLLVLGIGLLHTASAVTHSLKYFYTASSGVTNFPEFVGVGMVDDVQMVHYDSNSQR
VVCKQDWMNKQPDTQYWEREKVNLLGSQQIFKVNINTLKQRFNQSGGVHVFQKMYGCEWD
DESGATEGFNQFGYDGEDFVALDLKTETWTAPTPQAVITKHKWDNLSANTKHWKNYHTQT
CIEWLKKYLDYGKSTLKRTVPPSVSLLQKTPSSPVTCHATGFYPNGVMVFWQKDGKDQHE
DVENGETLPNDDGTFQKSTHLRVTPEEWKNNKYQCVVQVTGIKEDFIKVLTESEIQTNWG
KREKDSNIDTNVPNTIGSGPVIGIAVALLVIVVAVVGVVMWRKMKSEEGFVPASTDWDNS
GKGAQKT
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttttgtcttgctggtgctgggaataggacttcttcacacagcatctgctgtg
acacactccctgaagtatttctacactgcatcctctggagttaccaacttcccagagttt
gtgggtgtggggatggtggatgatgttcagatggttcactatgacagcaacagccagaga
gtggtgtgcaaacaggactggatgaacaagcagccagacacgcagtactgggagagggag
aaagtgaatttattgggttcccagcagattttcaaagtcaacatcaatactctaaagcag
cgttttaaccaaagtggaggtgtgcatgtttttcagaagatgtatggctgtgagtgggat
gatgagtctggagccacggaggggtttaatcagtttggatatgatggagaggattttgtg
gcattggaccttaagacagaaacatggaccgccccaacaccacaggcagtcattactaaa
cacaagtgggacaatctcagtgcgaatacaaagcactggaaaaactaccacacccaaacc
tgcattgagtggctgaagaagtatctggactatgggaagagcactctgaagaggacagtc
cctccatcagtgtctctgctccagaagaccccctcctctccagtgacctgccacgctaca
ggtttttaccccaatggagtcatggtgttctggcagaaagacggaaaagaccaacatgaa
gatgtggagaatggagagactctccccaacgatgatggaaccttccagaaaagcacccac
ctcagagtgacgcctgaggagtggaagaacaacaagtatcagtgtgtggttcaggtcact
ggtatcaaggaggacttcatcaaggttctgactgagtctgagatccagaccaactggggt
aagagggagaaagattcaaatatagatacaaatgtcccaaacaccattggctccggcccc
gtcattggaattgctgtagctcttctggtcattgttgttgctgttgttggggtcgtcatg
tggaggaagatgaagagcgaggaaggctttgttccagccagcactgactgggacaactct
gggaaaggtgcccagaagacttga
DBGET
integrated database retrieval system
