Salvelinus namaycush (lake trout): 120027243
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Entry
120027243 CDS
T07522
Name
(RefSeq) hairy/enhancer-of-split related with YRPW motif protein 1-like
KO
K09091
hairy and enhancer of split related with YRPW motif
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120027243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120027243
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120027243
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Motif
Pfam:
HLH
Hairy_orange
dCache_2
Motif
Other DBs
NCBI-GeneID:
120027243
NCBI-ProteinID:
XP_038828072
UniProt:
A0A8U0PN73
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Position
Sna32:complement(30604366..30607111)
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AA seq
333 aa
AA seq
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MKRNHDFSSSDSELDENIEVEKESADENGNVSSLLGPMSPSTKTQVNARKRRRGIIEKRR
RDRINNSLTELRRLVPSAFEKQGSAKLEKAEILQMTVEHLKMLHAVGGKGYFDAHALATD
YRGLGFRECLAETARYLSIIEGLDSADPLRIRLVSHLNSYTSQREALSISGLGQLAWGSA
FGSPPSAHLAHLLLRQQHHQHQQGATLQLPRSASNSPPSSSSSTPSSSSPIERAPRSSPH
GHAPSRLSGPTPLSEPLPPGLNLTVTSSAAVTAKLSPPLSLSSLSTLSAFPFPFSAFPLL
SPSTLSSPAYTPSSQASLGKQPYRPWGMEIGAF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggaatcacgattttagctcatcggacagcgagctggacgagaacattgaggtt
gagaaggagagtgccgatgaaaatgggaatgtgagttcactccttgggccgatgtctcca
tcaacaaaaactcaagtgaatgcgaggaagcgccgtcgaggaatcattgaaaaacggcgc
cgcgacagaatcaacaacagcctcaccgagctgcgtagactggtcccgagcgcgtttgag
aagcaggggtcagctaaactggagaaagcagagattctgcagatgacggtggaacatctg
aagatgcttcatgctgttggaggaaaaggttactttgatgcccatgctctggccacggac
taccgaggtctgggtttcagggagtgtctggctgagacagcccgctacctgagcatcatc
gaggggctggacagcgctgaccccctgaggatccgcctggtctcccacctgaatagctac
acgtcccagagagaggccctctccatctctgggctggggcagctggcctggggctcggcc
ttcgggtcgcccccctccgcccacctggcccacctcctcctccggcagcagcaccatcaa
catcagcagggggcgacgttacagttaccacggagcgcctccaacagccctccttcatcc
tcctcttctactccttcatcctcctctccgattgagagagcgccacgttcctcgccccat
ggccatgctcccagcaggcttagcggtcccacccccctctctgagcccctccccccggga
ctgaacctcaccgtgacctcctcagccgccgtgaccgccaagctctcccctcccctctct
ctgtcctccctctccaccctgtcggcgttccccttccccttcagtgccttccccctgctg
tcccccagcaccctcagctcccctgcctacaccccctccagccaggccagcctggggaag
cagccctaccggccctggggcatggagataggggctttctga
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