Salvelinus namaycush (lake trout): 120027540
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Entry
120027540 CDS
T07522
Name
(RefSeq) keratin, type I cytoskeletal 13-like isoform X1
KO
K07604
type I keratin, acidic
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120027540
04147 Exosome [BR:
snh04147
]
120027540
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
120027540
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120027540
Exosomal proteins of other body fluids (saliva and urine)
120027540
Exosomal proteins of colorectal cancer cells
120027540
Exosomal proteins of melanoma cells
120027540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
AIF-1
YabA
DUF2461
Nuf2_DHR10-like
RelA_AH_RIS
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
120027540
NCBI-ProteinID:
XP_038828462
UniProt:
A0A8U0PQD9
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Position
Sna2:complement(65339247..65342596)
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AA seq
516 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGGGTMSMRSGGGGGMGMGSSRFSSMGGGGGGGGRVTAMRAGSV
YGGAGGSGVRISSSSFGSGGGGGGGSGGGGYGFRMGGGGGGGGFSFGMGGGGGGGSYGFG
MGGGGGGGGGADINVSVNEKATMQNLNDRLSTYLEKVRMLEAANAELELKIRQFLESKTS
PSARDYSGFHAIIADLQDKIQAATCLNGSIYLSIDNSKLAADDFRNKYENELAMRQSVEA
DIAGLKRMLDEMTMARSDLEMQIEGLKEELIYLKKNHEEELLAMRTQMTGQINVEVDAAP
QEDLTRVMAEIREQYEAVSAKNQRDLESWFQTKTETLNKEVASSTEVLQTSKSEISEIRR
TLQGLEIELQSQLSMKGSLENTLAETEGRYSMQLGRLQNQVTSLEEQLMSLRSDMERQGQ
EYKMLLDIKTRLEMEIAEYRRLLDGEASGLVHSSSKSGHSSSSSHISSSSSGVSSGLSSS
SSGPSSSTSTTRKVVIVTEEMVDGKVVSSSETKHTS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagcggcggtggaggcggaggtggc
accatgtccatgaggtctggaggtggaggtggaatgggtatgggctcctcccgcttctcc
tcgatgggtggtggtggtggtggaggaggccgcgtcactgccatgagggccggcagtgtg
tatggaggtgcaggaggctccggggtgcgcatctctagctcctcgttcggttccggcggc
ggaggtggtggtggtagtggtggtggcggatatggtttcagaatgggagggggcggcggc
ggtggcggttttagttttggcatgggagggggcggcggcggtggcagttatggttttggc
atgggtgggggtgggggtggcggcggtggagctgacattaatgtgtcggtcaatgagaag
gccacaatgcagaacctgaacgaccgcctgtccacctacttggagaaggtgcgcatgcta
gaggcggccaacgccgagctggagctgaagatccgtcagttcctggagagcaagacgtcc
cccagcgctcgtgactactctggcttccacgctattatcgccgaccttcaggacaagatc
caggctgccacctgcttgaacggaagcatctatctcagcatcgacaactcaaagcttgct
gcagacgacttcagaaacaagtatgagaacgagctggccatgcgtcagtcagtggaggct
gacatcgccgggctgaagaggatgctggacgagatgaccatggccagatctgacctggag
atgcagatcgaggggctgaaggaggagctcatctatctcaagaagaaccatgaggaggag
ctgcttgccatgaggacgcagatgactggacaaatcaacgtggaagtggacgcagcacca
caggaggacctgaccagagtaatggctgagattcgtgagcagtatgaggccgttagtgcc
aagaaccagcgtgacctggagtcctggttccagaccaagacagagacgttgaacaaggag
gtggcgtccagcacagaggttctccagacctccaagtcagagatctcggagatccgtcgc
acactgcagggcctggaaattgaactgcagtcacagctcagcatgaaaggctccctggag
aacacgctggcggagacggaaggccgttactccatgcagctgggacgcctccagaaccaa
gtgaccagtctggaagagcagctaatgtctctccgcagcgacatggaacgccagggccag
gagtacaagatgctgctggacatcaagacacgcctggagatggagatcgctgagtacagg
aggctgctggacggagaggctagcggccttgttcacagctcctcgaaatctggacacagc
tcttccagctcccacatcagctcctctagctccggcgtcagctccggcctcagctcctcc
agctccggccccagctcatctacctccaccacacgcaaggtggtgatcgtcacagaggaa
atggtggacggcaaggttgtctcctcaagtgaaaccaaacacacctcttaa
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