Salvelinus namaycush (lake trout): 120031031
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Entry
120031031 CDS
T07522
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120031031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120031031
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120031031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
120031031
NCBI-ProteinID:
XP_038832489
UniProt:
A0A8U0PZ89
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All DBs
Position
Sna3:complement(36424228..36440551)
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AA seq
1189 aa
AA seq
DB search
MSSREKRLIALISIVFCATAIFCLVLYYIPTLLYIAFILGVCCVACYYHSGESLYVSLGP
HPRRGLRIPPVLRRWLPGIANGVPTAGRVRSRTVKDDVRESVVFTGQRRFESAICRKDAG
HSDSFLLSPRDILMGSYIGKAESPPSVGRPRAGASSGANPNAREQLTLRERLARPNQAVS
TPNRRLSFGGEPLGTMGRFTITPQRHYPLQQTGTSSVGILPPNQWDGFRKKNILTPRNSP
AVHSPVTVKIARPDHNTTRSQLFDHLNSPGVLGSPGLGAPVDPCSRETVLSVLKESRKRV
VEDDRSFTAWQKSKRRRHDSSGSAHLAFEPLLPNGAPSQLVLNSLKRGLNAMVEESTMKR
SRTSSISSMSCGLTPSGTLGSVRNSIRSSLSSSQGVSPWKKASTRSLSPLSSPGSSRSQT
PERASKKPREEDARSPSSVSLARSDKTLTDPAPTTGKLSPAPEVPVASASSDSAGSGKRK
RKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLKEPEPEKPAPVVTT
SSKPPVSDNPTPTLLASHLTVSMPASVAAPIPVINLDPVPSSTVNTAPAYPVTNTPAANP
LLESLKMMRNNPLTSAAADNTTAVTTHVPLVPAEQKSKTSLTAPQLTLPSQPALPSLSQP
ALPSLSQPALPSLSQPALPSLSQPALPSLSQPALPSLSQPASTMPSAFTQALSQVTKAPS
SVPILGGASLFGMVNPLTALSSSPAPTTTTTATTETTSSNNPLLSSGFKPIFGATASAPE
GTPALPTFKPIFGSATATSAFGQPASTSAPSNASASATVFSRLTNSSTVAPAASLFTGLS
NSTAPSTNPATPPSVKCLFGNWSALPATTAATTTATGSTFQFGTASTTAPGPTLSSTAAA
TTSNSGFSFGAMTTTSADTQLAPSATAQGGFTFGQPVATQNSTTASFCGFGMPTAATATA
SAPANQSTFTFGKSSFEAPAASAFPSAIQAPAATAAANPFTFGSSATGATPAPFAFGAAA
TTAASTFGTTTKLAFGANSTGFAFGNTTGTTAAPAFGSATQTVGILPASAPTFSFGGVST
QQAPATPAQPATGGFNFGAAISGTQFGTSNPTTQTPGFNFGTSTPAFGQSTAAGPVPFGS
PGTPVQGFSAMGSSSFGSPSAPSFSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagagagaagcgattaatagcgcttatctctatcgtgttctgtgctaccgca
atattctgtctagttctctattatattccaacattgctttacatagcttttattcttgga
gtttgttgcgttgcatgttattatcacagcggagaatctctttacgttagtttaggccct
catccacgccgtggtctgagaattccacccgtgctgcgacgctggttgccagggattgca
aacggagtacccacagcgggaagagttaggagtcgcactgtcaaggatgatgttcgggaa
tcagtagtatttactggccaacgacgtttcgagagcgctatttgtcggaaagacgcgggt
cacagtgactcatttcttctcagtcctcgggatatactcatgggaagttacattgggaag
gcagaaagtcctccctcagttgggaggccgcgagcgggtgcaagttcgggtgctaacccc
aacgcacgagaacagctaactttacgcgaaagattggcgcgacccaaccaggctgtcagt
actccaaacagacgtctgtcattcgggggggagccccttggcactatgggcaggttcacc
atcactccccagcgccactaccccctccagcagacgggcacctcctctgtgggcatcctg
cccccgaaccagtgggacggcttcagaaagaagaatattctcacccctcgcaactctccg
gcagtccacagtccagtcacagtgaagatcgctaggccagatcacaacaccactcgatcc
cagttatttgatcatttgaactccccgggagtccttggctctccaggcctgggggcccct
gtagacccctgctccagggagactgttctgagcgtgctcaaagagagtcgcaaaagagtg
gtggaagatgacaggagcttcactgcatggcaaaagagcaaaaggaggcgccatgacagc
agtgggagtgctcacttggcatttgagccactgctgcccaatggagctccatcacagctg
gtgctgaattctctgaagcgagggctgaatgctatggtggaggagtcaacaatgaagagg
tcacgcacctcctccatcagctccatgagctgtgggctgacccccagcggcaccctgggc
tcggtccgcaactccatccgcagctccctcagctcctcacaaggcgtttctccgtggaaa
aaagcctccacccgcagtctgtccccgctctccagccctgggtcgtcccggtcccagacc
ccagagagagcctctaaaaagcccagggaagaggacgctcgctcacccagctccgtgtcc
ttggcgaggtctgacaagacattgacagacccagcaccaaccactgggaagctgtctcca
gcccctgaagtccctgtggcttcagcctcgtcagactctgccggtagtgggaaacggaaa
cgtaagattccgctggtgtccagccgtagaggagaccaaatctctttgcctccacctcct
gagttgggctacaccatcacggtgaaagacctggatcaggagaagaaagccgctctcagc
cagatcaacacagtcctcaaagagcctgagccagagaagcctgctccagtagtgaccaca
tcttctaagcctcccgtgtcagacaaccccacacccaccctgctggctagccatcttacc
gtatcaatgcctgctagtgtggcggctcctatccctgtcatcaacctggaccccgtcccc
tcaagcaccgtcaacacggccccagcctaccccgtcaccaacacccctgcagccaacccc
ctcctggagtctctgaaaatgatgaggaacaaccccctcaccagtgctgctgctgacaat
actacagcagtgacgacccatgtaccactggtgcctgcagagcagaagtcaaagaccagc
ttgactgctcctcagctcacactaccctcccagcctgcactaccctccctctcccagcct
gcactaccctccctctcccagcctgcactaccctccctctcccagcctgcactaccctcc
ctctcccagcctgcactaccctccctctcccagcctgcactaccctccctctcccagcct
gccagcaccatgccctctgccttcacccaggcactgagccaagtcaccaaggcccccagc
agtgtccccatcctgggtggagcgagcctgtttggaatggtcaatccactgactgccctg
tcctcctcaccggcccccactactaccacaaccgccaccacagaaacaaccagtagtaat
aatcccctcctgtcctctgggttcaagcccatcttcggggccacggcctcagccccagag
ggcacacctgctcttcccacctttaaacccatatttggaagtgccacagccaccagtgct
tttggacagccagcctccacctcagccccctccaatgccagtgcatctgccacagtgttc
agcaggctaaccaacagcagtacagtggccccagccgcctccctgttcaccgggctgtct
aatagcaccgccccctccaccaacccagccaccccgccatctgtcaagtgtctgtttgga
aactggagtgcgctgcctgcaacgactgctgccacaaccactgccacaggaagtaccttc
cagttcggcactgcctccaccacagctcctggacccaccctcagctccaccgcagccgcc
accactagcaacagcggcttttcgtttggtgcgatgaccaccacctctgccgacactcaa
ctcgcaccctcagccaccgcccaggggggattcacctttggccagcctgtagccacccag
aactctaccaccgcatccttctgtggctttggcatgcccactgcagccactgctactgct
tctgcacctgcaaaccagtccactttcacgtttgggaagtcgtcgttcgaagctccggcg
gcatcggcgttccccagtgcgattcaggccccggctgctactgcggcagctaatcctttc
acgtttggttcatctgccactggggccacccctgccccttttgcttttggcgcggctgcc
actacggcggcctctacctttgggaccaccactaagctggcatttggagccaactccaca
ggttttgcatttggcaacaccacgggcaccacagcagcccctgcctttggctctgccacc
cagactgtcggcatactcccagcctccgccccaactttctcgtttggtggtgtgtccaca
cagcaggcccctgctacccctgcccagccagccaccggaggtttcaacttcggcgcagcc
atttcaggcactcagtttggaacctctaaccccacaacacagacaccaggcttcaacttt
gggacgtctacccctgcttttggccagagcacagctgcaggtcctgtcccctttggaagc
ccaggaactccagttcaaggattcagtgctatgggatcctcatcattcggctctccatca
gctccttcgttctccattggcgctggctccaaaacatcaggggcgcgccagagactacag
gcccgacggcagcaccccaggaagaagtag
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