Salvelinus namaycush (lake trout): 120031754
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Entry
120031754 CDS
T07522
Name
(RefSeq) liprin-beta-1-like isoform X1
KO
K27096
liprin-beta
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120031754
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120031754
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
HR1
Motif
Other DBs
NCBI-GeneID:
120031754
NCBI-ProteinID:
XP_038833476
UniProt:
A0A8U0TZG5
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Position
Sna38:17511043..17542988
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AA seq
907 aa
AA seq
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MMSDASEMLAAALEQMDGIIAGSKAMGYSNGLFDCQSPTSPFLGSLRALHLLEDLWAALE
MMDQDEREGLRCQVPDTTADSLAEWLQQGQLTNGHGSAMIYQERLSRVESDKECLVLQMT
CGVLLSDDCPQVSVLSDQVEVQGEKIRDLDMCLEEHREKLDATEETLQQEFLTRSTLETQ
KLELMTEVSSLKLKLTTVARDRRDSEGLYQEVNDLRFRVTDMENERLQCEKKLKSTKEEL
QTLQRQLEELRRLRDQATQGVLTPDRTDGEKDVDVLRMKRAMESLMSASNDKDRRIEELQ
ESITRYKKVQDLMKDTLNEDNYDDIQDDRSPSIQVAMDTDQATLAVGEETGRSCDEIPSI
AVFSELEQESLIQEPDTDSPPEVPPHSAGSLGHVNGNTEQTTTEEPRPPSTSPSNPTSNE
SFGTKKARSSFGRGFFKMRGGKRTSSAPNLAETERNGTDHLDLAGAPPHKPQGGDSSETL
PSSPEAKKKSRGFKKFLGRLKRSHSTSLDLEETETEFRRGGVRATAGPRLGWSRDLQHSA
NDVDAPFAQWSKEQVCAWLQEQGLGLHVAQAQQWIRSGYTLLQASQHDLEKELGIKQPLH
RKKLQLALQALGSEEDVSKAKLDHNWVTRWLDDIGLPQYKSQFDEGRVDGRMLHYMTVDD
LLSLKVGSVLHHLSIKRGIQVLRLNFYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLR
SVDLAEYAPNLRGSGVHGGVMVLEPRFNVESLALLLNIPPNKTLLRRHLATHFHLLIGSV
AQRSKQECLENPDYTLLTATAKVKPRRLSFGGFGTLRKKRQEDSEEYVCPMDVEMPKNSS
FQGGLRSYEDDLYQLEQMDDSEGAVRQIGAFSEEIDNLTSMLKEDEFFSEVSSRSPEASV
TDDDSNV
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgacgccagcgagatgttggcagccgccttggagcaaatggatgggatcata
gcaggttccaaggccatgggctactccaatgggctgtttgactgccagtcgcccacctct
cccttcctgggaagcctgcgggcgctgcacctgctggaggatctgtgggcggcgctggag
atgatggaccaggatgagagggagggcctccgctgccaggtccctgacaccaccgccgac
agcctagcggagtggctgcagcagggacaactgaccaacggacatggctccgccatgatc
taccaggaacgactgtcacgggtggagagcgataaggagtgtctcgtcctccagatgaca
tgtggcgtattattgagtgatgactgtccccaggtgagtgttctctcagaccaggtggag
gtgcagggggagaagatcagggatctggacatgtgtctggaggagcacagagagaaactc
gacgccactgaagaaacgctgcagcaggagttcttgaccaggtcgaccctggagacccag
aagctggagctgatgaccgaggtgtccagtctgaaactgaagctgaccactgtggcgaga
gatcgcagggatagtgaggggttgtaccaggaagtcaatgacctgcggttcagggtgacc
gatatggagaatgaaagactgcagtgtgaaaagaaacttaaatccaccaaagaggaactg
cagactcttcagaggcagctggaggagctgaggaggctaagagaccaggctacacaggga
gtcctgaccccagacagaacagatggagagaaagatgtggatgtgctgaggatgaagagg
gccatggagtccctgatgtcagctagcaatgacaaggaccggaggatcgaggagcttcag
gagtctatcacacggtacaagaaggtccaggacttgatgaaagacacactgaatgaagac
aattatgatgacatccaggatgacagatccccctccattcaggtcgccatggatacagac
caggccacactggcggttggggaggagacaggaaggagctgtgacgagattccatctatt
gcagtgttttctgagctggagcaggagagcctgatacaggaaccagacacagacagtcca
ccagaagtcccaccacattcagcaggtagcttgggccacgtaaacggcaacacagagcag
acaacaactgaggagcccagacccccatccacctccccatcaaaccccaccagtaatgaa
agctttgggaccaagaaggcccgctcctcctttggacgtggtttcttcaagatgcgtgga
ggcaagaggacgtctagtgccccaaatctggccgagaccgagcgtaatggcacagaccac
ttggacttggctggtgccccgccacacaaacctcagggaggagacagcagcgagacccta
ccttcctcaccggaggccaagaagaagtccagaggctttaagaagttcttaggcaggctg
aagagaagtcactccacctcgctagacctggaggagacagagactgagttcaggagagga
ggagtcagagccacggccggcccccgactgggctggtcacgtgacctgcagcacagcgcc
aatgatgtggacgctccctttgcacagtggagtaaggagcaggtgtgtgcgtggctgcag
gagcagggcctggggctgcatgtggctcaagcccagcagtggatccgctcaggatacacc
ctgctgcaggcctcccagcacgacctggagaaggagttagggatcaaacagcccctccac
aggaagaagctgcagctggctctccaggcactgggatcagaggaggatgtcagcaaggcc
aaactggaccacaactgggtgaccagatggcttgatgacattggtctgccgcagtataag
agccagtttgatgaggggagggtcgatgggagaatgctacactacatgactgtggatgac
ttgctgtctctaaaagtgggcagtgttctccaccacctcagcatcaagagaggcatccag
gtcctccggctcaacttctacgagcccaactgcctccgccgacggccgtctgacgagaat
aacatcacgccagcggagatctcccagtggaccaatcacagagtgatggagtggctgaga
tcagtggacctggctgagtacgctcctaacctgaggggcagcggtgtgcacgggggggtc
atggtgctggagccccgcttcaacgtggagtccctagccctcctcctcaacatccctccc
aacaagaccctgctgcgccgccacctggccacccacttccacctgctcatcggctccgtg
gcccagcgcagcaaacaggagtgtctggagaaccctgactacaccctgctcactgccacc
gccaaggtcaagcccagaaggctgtcgttcggtggcttcgggaccctgcgtaagaagcgc
caggaggacagcgaggagtacgtgtgccccatggacgtggagatgcccaagaacagcagc
ttccaggggggcctgaggagctacgaggacgacctataccagttggagcagatggacgac
tcggaaggggctgtgaggcagataggagcattttctgaggaaatcgacaacctgacgagc
atgctgaaggaggatgagttcttcagcgaggtctcctctcgctcccccgaggccagtgtt
accgatgacgactccaacgtgtga
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