Salvelinus namaycush (lake trout): 120031761
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Entry
120031761 CDS
T07522
Name
(RefSeq) transcription factor SOX-5-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120031761
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120031761
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HIP1_clath_bdg
MATalpha_HMGbox
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
120031761
NCBI-ProteinID:
XP_038833490
UniProt:
A0A8U0PYM0
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Position
Sna38:complement(11794847..11820118)
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AA seq
422 aa
AA seq
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MQVSPGAKHSSMSQTNLNTHSPTNTHQEKSRSTPPPKPKDEGAQPLNLSSKPKTASESKS
PTSPASPQVPTMKLGHHSTGSMKHSTAPSSIGGPPSRVSSIDLLSSLSSGGYLNDHEAVT
KAFAEARQMKEQLKREQQVLDAKVAAVNNLSLNNGRSDKDKAALESLSHQLKQQSEDREK
FNHAMMDFTMSGDSDGSPSVSDSRMFREARGRGNSEPHIKRPMNAFMVWAKDERRKILQA
FPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDG
KKLRIGEYKAIMRNRRQEMRQYFTVGQQAQLPLSSAGVVYPGALSMAGLPSPQMPSEHSS
LSSSPEHAAPPLQTPYHPSLKGDKTRVKQEELRLDDSNGDAYDDFDYEDEEGDYGSDNDN
HQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgtctccaggggccaaacacagcagtatgtcccagaccaacctgaacacccac
tctcccaccaacacacaccaagagaagagccgcagcaccccgccgcccaaacccaaggac
gagggtgctcagcccctgaacctgtcgtccaagcctaagacagcaagcgagagcaagtca
cccacctcccccgcttccccacaggtccccaccatgaagctgggccaccatagcaccgga
tccatgaaacacagcacagccccctccagcatcggaggaccaccgtccagggtcagctcc
atagacctgctgtcatctctgtcctccgggggttatctgaacgaccatgaggctgtgacc
aaggccttcgctgaggccaggcagatgaaggagcagctgaagagagaacagcaggtgttg
gacgccaaggtggccgccgtcaacaacctcagcctcaacaacgggcgctccgacaaggac
aaggcagccctggagagtctgagccaccagctgaagcagcagtcagaggacagagagaag
ttcaaccacgccatgatggacttcaccatgagtggagactcagatggcagccccagtgtg
tctgattccaggatgttccgtgaggcccggggccgaggcaacagcgaaccgcacattaaa
cgacccatgaatgctttcatggtctgggcaaaggatgagaggaggaagattctccaggct
ttccccgacatgcacaactccaacatcagcaaaatcctcggttctcgttggaagtccatg
actaacctggagaagcagccgtactacgaggagcaggccaggctgagcaagcagcacctg
gagaagtacccggactacaagtacaaaccccggcccaaacgaacctgtctggtggacggg
aagaagctgaggattggagagtacaaggccattatgaggaaccgccggcaggagatgaga
cagtacttcactgtgggacaacaggcccagctgcccttgtcctcggcgggcgtggtgtac
ccaggtgccctctccatggcaggcttgccctccccccagatgccctcggagcactcctca
ctgtccagcagccccgagcacgccgccccacccctccagaccccctaccaccccagcctc
aagggagacaagacccgagtcaaacaggaggagctgcgattggacgacagcaatggtgat
gcgtacgacgactttgattatgaggacgaggagggagattatggaagcgataacgacaac
caccaataa
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