Salvelinus namaycush (lake trout): 120032499
Help
Entry
120032499 CDS
T07522
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120032499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120032499
03036 Chromosome and associated proteins [BR:
snh03036
]
120032499
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120032499
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120032499
PBAF complex
120032499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
Pcf11_helical
RMI1_C
Motif
Other DBs
NCBI-GeneID:
120032499
NCBI-ProteinID:
XP_038834534
UniProt:
A0A8U0Q0V0
LinkDB
All DBs
Position
Sna39:complement(14685352..14694318)
Genome browser
AA seq
429 aa
AA seq
DB search
MSKRERERPYAPPPPPAPTTQLPNTPGFVGYNPYSHLAYNNYRLGGTTSNNSRATNSSGI
NIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLN
DYEAEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAD
DPDDYDDGFSMKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVH
QRKLEAELLQIEDRHQDKKRKFIDATESFNSELKRLCCMKVEVDMEKISAEVAAAEDASR
RRMSEREKEASTSSSLEEEEKPVGPSNGSKSQQVSVSDSSNKEREETEPSPMDTGEKSKA
SEESTARPASEVEEGAPSEDKESVPEGVMEDGTSDSNTGSETTSAVTEDAPPSEPAASEG
PSRARPTAH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagagaaagagaaaggccatatgcccctccccctcccccagcccctacaaca
caattgcccaacacccccgggtttgtggggtacaacccctacagtcatctggcttacaac
aactacaggctgggagggacaacaagcaacaacagtcgggcaacgaattcttcaggaata
aacattccaaagccacccaagccgccagacaaaccgttgatgccatacatgcgatatagt
cgcaaggtttgggatcaagtaaaagcctccaatcctgatctgaaactatgggaaattggg
aagataatcggtggcatgtggagggacctcactgatgaggagaaacaggattacttgaat
gattacgaagcagagaagattgagtacaatgagagcatgaaggcctaccacaactctcca
gcctacctggcttacgtcaacgctaagagccgcgccgaggccgctctggaggaggagagc
cgacagcgccagtctcgtctcgacaagggcgagccgtacatgagtatccagccagcagac
gacccagatgattacgacgacggattctccatgaagcactcggctgccgcccgtttccag
cgcaaccaccggctgatcagcgagatcctgagcgagagcgtggtccccgacgtgcgctcc
gtcgtcactaccgcccgcatgcaggtcttgaaacggcaggtccagtctcttatggtgcac
cagaggaagctggaggcggagctacttcagattgaagaccgtcaccaggacaagaaaagg
aaattcatcgatgccacagagtctttcaacagcgagctgaaaaggctgtgttgtatgaaa
gtggaggtggacatggagaagatatctgcagaggtcgctgcggcagaggatgcatcacgc
aggcgtatgtcggagcgggagaaggaggcgtccacgtcctctagcctggaggaggaggag
aaaccagttggcccgtcaaatggcagcaagagccaacaggtgtctgtcagtgacagcagc
aacaaggagagagaggagacggaacccagccccatggatactggtgagaagtcaaaggcc
tcggaggagtcgacggctcgtcctgccagtgaggttgaggagggggcgccgtcggaggac
aaggagagtgttccggaaggggtgatggaggacggcaccagtgacagtaacacagggtcg
gagaccacctctgctgtgacggaggacgccccgcccagcgagccagcagcctcagagggg
ccgagcagggcacgccctaccgcccactga
DBGET
integrated database retrieval system
