Salvelinus namaycush (lake trout): 120032573
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Entry
120032573 CDS
T07522
Symbol
cxcl12b
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
snh04672
Intestinal immune network for IgA production
snh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120032573 (cxcl12b)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120032573 (cxcl12b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120032573 (cxcl12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120032573 (cxcl12b)
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120032573 (cxcl12b)
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Chemokines
120032573 (cxcl12b)
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Chemokines
120032573 (cxcl12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
120032573
NCBI-ProteinID:
XP_038834641
UniProt:
A0A8U0PYT3
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Position
Sna39:6068852..6082061
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AA seq
99 aa
AA seq
DB search
MDVKVLAVLVLLAVALDVPPSTAKPISLVERCWCRSTLNTVPQRSIRELKFLHTPNCPFQ
VIAKLKNNREVCINPETKWLQTYLKNAINKVKKSRRRAQ
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaaagtactggctgtgttggtcctactggctgtggccttggatgtacctccc
tctacggctaagcccatcagcctggtagagaggtgctggtgtcgctccactctcaacacc
gtccctcagaggagcatcagagagctcaagttccttcacacacccaactgccctttccaa
gtcattgccaagctgaagaacaacagggaggtgtgcattaaccccgagaccaaatggctg
cagacgtacctgaagaatgccattaacaaggtgaagaagtccagaagacgtgctcagtaa
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