Salvelinus namaycush (lake trout): 120032920
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Entry
120032920 CDS
T07522
Name
(RefSeq) keratin, type I cytoskeletal 13-like isoform X1
KO
K07604
type I keratin, acidic
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120032920
04147 Exosome [BR:
snh04147
]
120032920
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
120032920
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120032920
Exosomal proteins of other body fluids (saliva and urine)
120032920
Exosomal proteins of colorectal cancer cells
120032920
Exosomal proteins of melanoma cells
120032920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
AIF-1
DUF2461
CENP-F_leu_zip
ATG16
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
120032920
NCBI-ProteinID:
XP_038835113
UniProt:
A0A8U0U0E9
LinkDB
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Position
Sna39:14471591..14483179
Genome browser
AA seq
465 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGTMSMRSGGGGSSRFSSMGGGGGGGGRVTAMRAGSVYGGAGGS
GVRISSSSFGSGGGGGGGGYGFGMGGGGGGGGGFGMGGGGGGGGADINVSANEKATMQNL
NDRLSTYLEKVRKLEAANAELELKIRQFMESKTSPSARDYSRFHTTIADLQDKIQAATRV
NGGIYLNIDNAKLAADDFRTKYENELAMRQSVEADIAGMKRMLDEMTMARSDLEMQIEGL
KEELIYLKKNHEEELLAMRTQMTGQINVEVDAAPQEDLSRVMAEIREQYESVSAKNQRDL
EAWFQTKTETLNKEVASSTEVLQTSKSEISEIRRTLQGLEIELQSQLSMKGSLENTLAET
EGRYSMQLGRLQNQVTSLEEQLVSLRSDMERQGQEYKMLLDIKTRLEMEIAEYRRLLDGE
ASGLGISSSKSGHSSSSSTKRKEVVIKEEKVDGKVVSRSETIHTT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagcggtggtggaggtggcaccatg
tccatgaggtctggaggtggaggctcctcacgcttctcctcgatgggtggtggtggtggg
ggaggaggccgcgtcactgccatgagggccggcagtgtgtatggaggtgcaggaggctct
ggggtgcgcatctctagctcctcgtttggttccggcggcggaggtggtggtggaggttat
gggttcggaatgggagggggtggtggcggaggaggcggtttcggcatgggaggtggtggt
ggcggcggtggagctgacattaatgtgtcagccaacgagaaggccacaatgcagaacctg
aacgaccgcctgtccacctacttggagaaggtgcgcaagctagaggcggccaacgccgag
ctggagctgaagatccgtcagttcatggagagcaagacgtcccccagcgctcgcgactac
tctcgcttccacactactatcgccgacctgcaggacaagatccaggctgccactcgcgta
aacggaggcatctatctgaacatcgacaacgcaaagctcgctgcagacgacttcagaacc
aagtatgagaacgagctggccatgcgtcagtcggtggaggcggacatcgccgggatgaag
aggatgctggacgagatgaccatggccagatctgacctggagatgcagatcgaggggctg
aaggaggagctcatctatctcaagaagaaccatgaggaggaactgctggccatgaggaca
cagatgactggacagatcaacgtggaggtggacgcagcaccacaggaggacctgtccaga
gtcatggctgagatccgtgagcagtacgagtccgttagtgccaagaaccagcgcgacctg
gaggcttggttccagaccaagacagagacgttgaacaaggaggtggcgtccagtacagag
gttctccagacctccaagtcagagatctcagagatccgtcgcacactgcagggcctggag
atcgaactgcagtcacagctcagcatgaaaggctccctggagaacacgctggcggagacg
gagggccgttactccatgcagctgggacgcctccagaaccaagtgaccagtctggaagag
cagctagtgtctctccgcagcgacatggaacgccagggccaggagtacaagatgctgctg
gacatcaagacacgcctggagatggagatcgctgagtacaggaggctgctggacggagag
gctagcggtctcggcatcagctcctcaaaatctggccacagctcctccagctccaccaaa
cgcaaggaggtggtcatcaaagaggaaaaagtggatggcaaggttgtctccagaagtgaa
accatacacaccacataa
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