Salvelinus namaycush (lake trout): 120033919
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Entry
120033919 CDS
T07522
Name
(RefSeq) importin subunit beta-1 isoform X1
KO
K14293
importin subunit beta-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120033919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
snh03009
]
120033919
03036 Chromosome and associated proteins [BR:
snh03036
]
120033919
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120033919
Pre-60S particles
120033919
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120033919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
IBN_N
HEAT_2
Cnd1
Arm
MMS19_N
DUF6869
pPIWI_RE_Y
Motif
Other DBs
NCBI-GeneID:
120033919
NCBI-ProteinID:
XP_038836241
UniProt:
A0A8U0Q4Z1
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Position
Sna41:4694715..4714751
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AA seq
879 aa
AA seq
DB search
MELITILEKTVSPDRNELEAAQKFLEQAAIENLPTFLVELSKVLANPGNTQVARVAAGLQ
VKNSLTSKDPDVKTRYQQRWLAIDANARREIKNFVLQTLGTETYRPSSASQCVAGIACAE
IPVTQWPELIPQLVANVTDPSSTEHMKESTLEAIGYICQDIDPEQLQDNANQILTAIIQG
MRKEEPSNNVKLAATNALLNSLEFTKANFDKETERHFIMQVVCEATQCPDTRVSIVRVAA
LQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEA
TEASEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLAT
CCEDDVVPHVLPFIKEHIKHPDWRYRDASVMAFGSILEGPELNQLKPLVIQAMPTLIELM
KDPSVVVRDTTAWTVGRICELLPEAAINEVYLAPLLQCLIEGLGAEPRVASNVCWAFSSL
AEAAYEATDAAEDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSAAYEALMEIVK
NSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQH
QDALQISDVVMASLLRMFQNTAGSGGVQEDALMAVSTLVEVLGADFQKYMDAFKPFLGIG
LKNYAEYQVCLAAVGLVCDLCRALMSNILPYCDEIMQLLLENLGNENVHRSVKPQILSAF
GDIALAIGGEFKKYLEIVLDTLQQASQAQVDKTDYDMVDYLNELREGCLEAYTGIIQGLK
GDQENVHPDVMLVQPRVEFILSFIHHIAEDEDHSDGVVANAAGLIGDLCTAFGKDVMKLV
ELRPLINDLLTEGRRSKTTKTKTLATWATKELRKLKSQA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggagctgataacaatcctcgaaaaaactgtctctccagatcgaaatgaactggaggcg
gcacagaagtttctggagcaagcggcaattgaaaatttgcccacgttcctggtggagctc
tccaaggtgctcgccaaccctggcaacacccaggtggctcgcgtggccgcagggctgcag
gtgaagaactcactcacctccaaagacccggacgtgaagacacgctaccagcagagatgg
cttgccatcgatgccaacgcccggagggagatcaagaactttgttctgcagaccctgggc
acggagacgtaccggcccagctcggcctcccagtgcgtggctggcatcgcctgcgcagag
atccccgttacccagtggcccgagctcattccccagctagtggccaatgtgacggacccc
agcagcactgagcacatgaaggagtccaccctggaggccattggatacatctgccaggac
atagaccctgagcagctgcaggacaacgccaaccagatcctgacagcaatcatccagggc
atgaggaaggaggagcccagcaacaacgtcaagctggctgccaccaacgcgctgctcaac
tcactggagttcaccaaagccaactttgacaaagagacggagaggcactttataatgcag
gtcgtctgcgaggccacacagtgcccagacaccagagtgagtatcgtacgagtggctgcc
ttacagaacttggtgaagataatgtctttgtattatcagtacatggaaacgtacatgggc
ccagcactgtttgcgatcacaatagaagccatgaaaagtgacattgatgaagttgcctta
caaggaatcgagttctggtcgaacgtgtgtgacgaggagatggatttggccattgaagcg
actgaggcatcggagcagggccggcccccggagcacaccagcaagttctatgctaaagga
gccttgcaatacctggtgcccatcctcacccagacactcaccaaacaggacgagaacgac
gacgatgacgactggaacccgtgcaaggcggcgggcgtgtgcctgatgctgctggccacg
tgttgcgaggacgacgtggtgcctcacgtgctgcccttcatcaaggagcacatcaagcac
cccgactggcgctaccgcgacgcctccgtcatggccttcggctccatcctagaggggccc
gagcttaaccagctcaaacccctcgtcattcaggcaatgcccacgctgattgagctgatg
aaggaccccagtgttgtggtgagggacaccacggcctggacggtgggcaggatctgtgag
ctgctgccggaggcggccatcaacgaggtgtacctggcccctctgctgcagtgtctcatc
gagggcctgggggccgagccacgcgtcgcatccaacgtctgctgggccttctccagcctg
gcggaagccgcgtacgaagccacagatgcagcggaggaccaggaggagcctgccacgtac
tgcctctcctcctccttcgagctcatcgtccagaaactcctagaaaccacagacaggccg
gacggtcaccagaacaacctgcgtagcgcggcttacgaggccctgatggagattgtgaag
aacagcgccaaggactgctacccagccgtgcagaagaccaccctggtcatcatggaacgc
ctgcagcaggtcctgcagatggagtctcacatccagagcacgtcggacagaattcagttc
aacgacctccagtctctactgtgtgccaccctgcagaatgtgctgaggaaggtgcagcac
caggacgcgttgcagatctcagacgtggtgatggcctccctgctcagaatgttccagaac
accgccggctccgggggcgtacaggaggatgcgctcatggccgtctcaaccttggtggaa
gttttgggcgctgactttcagaaatacatggatgcctttaaacccttcctgggaattgga
ctgaagaattatgcagaatatcaagtgtgtctggccgcggtgggcctggtgtgtgacctg
tgccgagccctgatgtccaacatcctgccttactgcgacgagatcatgcagctcctgctg
gagaacctggggaatgagaatgtgcaccggtcagtgaagcctcagatcctgtcagcgttc
ggagacattgccctggccatcggaggggagttcaagaagtacctggagatcgtcctggac
acgctgcagcaggcgtcgcaggcacaagtcgacaagacggactatgacatggtggactat
ctgaacgagctgcgggagggctgtctggaggcctacactggcatcatccagggcctgaag
ggagaccaggagaacgtgcaccctgacgtgatgctggtgcagcccagagtggagttcatc
ctgtccttcatccatcacatcgctgaagacgaggaccactctgacggcgtggtggcaaac
gccgccggacttataggagacctgtgcacggcctttgggaaggacgtgatgaagctggtg
gagctgcggcccctcatcaacgacctgctgacggagggccggaggtccaagaccaccaag
accaagacgctggccacatgggccaccaaggagctgcgcaagctcaagagccaggcctga
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