Salvelinus namaycush (lake trout): 120035706
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Entry
120035706 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120035706
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120035706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
zf-RING_6
YscO-like
zf-RING_2
Spc24
Y1_Tnp
Fib_alpha
MAP65_ASE1
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
120035706
NCBI-ProteinID:
XP_038838195
UniProt:
A0A8U0Q7T1
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCVDLLKEPVTIPCGHSYCRSCIEDCWDQDVLKGVYSCPQCRET
FTPRPTLRKNNMLAELVEKLRKTGLQAAPPPALCYGGPADVACDVCTGTKKRKALMSCLP
CLASYCETHLQSHYESPALKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICMLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESFKHSAQAAVED
SDQIFTELIRSIERRSSEVKELIRDQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVIKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAGTLLSLSEGNRKVTCTDQVQPYPDHP
DRFTNRCQVLCREGLSGRCYWEVEWTGYVVTAVSYKDISRTETGNIFGFNNKSWSLKCSR
GDYCFRHNNVVSKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQTLYFGF
CLDGTADLVKL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtgtggat
ctactgaaggagccggtcaccatcccctgtggacacagttactgtaggagctgtattgag
gactgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggccaactctgaggaaaaataacatgttggctgagctggtggagaaactg
agaaagacaggactccaggctgctcccccacctgctctgtgctatggtggacctgcagat
gtggcgtgtgatgtctgcactgggaccaaaaagcggaaagccctcatgtcctgtctgccg
tgtctggcctcttattgtgagactcacctccaatctcactatgaatctcctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaagtttactgtcgtaccgatcagcagtgtatctgtatgctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcactctgcacaggcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagaccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggaaatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacctagcatcgttgtccgtcctcttcagtactttggagatgtgattaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcaggtacactcctctctctg
tctgaagggaacagaaaggtgacctgtacagaccaagtccaaccatatcctgaccatcca
gacagattcaccaaccggtgtcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggactggttatgttgttacagcagtctcatataaagacatcagcaga
acagagacaggtaatatatttggattcaataacaagtcctggagtttaaagtgctctaga
ggtgattattgtttcagacacaataatgttgtgtctaaagtatcaggtcctcagtcctcc
agagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctctgac
acaatgaccctcctccacagagtccagaccacattcactcagaccctgtattttgggttt
tgtctcgatggtactgctgatctggttaaactgtag
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