Salvelinus namaycush (lake trout): 120035724
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Entry
120035724 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120035724
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120035724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
Fib_alpha
zf-RING_2
zf-RING_6
Spc24
Y1_Tnp
LMBR1
MAP65_ASE1
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
120035724
NCBI-ProteinID:
XP_038838219
UniProt:
A0A8U0QAB7
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MAQQGDLLDQDQFCCSVCLDLLKEPVTTACGHNYCRICIEGCWDQDVLKGVYSCPQCRET
FTPRPTLRKNNMLAELVEKLRKTGLQAAPPPALCYAGPGDVACDVCTGTRKQKALMSCLA
CLASYCETHLQPHYESPALKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICMLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQKKVQQRFQEREKELKNLQKAVKSFKRSAQAAVED
SDKIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAHTHLSLSEGNRKVTCTDQVQPYPGHP
DRFTNRYQVLCRQGLSGRCYWEVEWTGDYVVTAVSYKDISRTERDGGFGYNNKSWSLECY
RGDYCFRHNNVATKVSGPQSSRVGVYLDHKAGTLSFYSVSDTRTLLHRVQTTFTQPLYPG
FWLNGTAELVKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagatctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcctgtggacacaattactgtagaatctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcacaccaaggcctacactgaggaaaaataacatgttggctgagctggtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggca
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtatgctgtgtacaatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagaagaaggtccagcagagattccaggagagagagaaggagctg
aagaatctccaaaaagctgtgaagtctttcaagcgctctgcacaggcagcagtggaggac
agtgataagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacacacacctctctctg
tctgaagggaacagaaaggtgacctgtacagaccaagtccaaccatatcctggccatcca
gacagattcaccaaccggtaccaggttctgtgtagacagggtctgtctggacgctgttac
tgggaggtggagtggactggtgattatgttgttacagcagtctcatataaagacatcagc
agaacagagagagatggtggatttggatacaataacaagtcctggagtttagagtgttat
agaggtgattattgtttcagacacaataatgttgcgactaaagtatcaggccctcagtcc
tccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctct
gacacaaggaccctcctccacagagtccagaccacattcactcagcccctctatcctggg
ttttggctcaatggtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
