Salvelinus namaycush (lake trout): 120038133
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Entry
120038133 CDS
T07522
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120038133
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120038133
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
120038133
NCBI-ProteinID:
XP_038839959
UniProt:
A0A8U0QDQ5
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Position
Sna3:74323711..74361686
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AA seq
474 aa
AA seq
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MLMSTDVASIMLPVTRGMMDRENDIDTATGPHSNTTGGPAAVVRGMKRGDPEQTAAALTE
LAGAECKRPRIDGTVGVGDIGQNNDPLTPGFLGYPPHSQGSQDSTGGQEGLVPPPFSAFP
PPPPPQNGLGTEFGGALFGAGGQGPSDSGAGTNGSATTSNILPTPQTEVSPGQVDGVGQC
VAVELAGVSGADSAEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKIIDVEIIFNERGSK
GFGFVTFETSADAEKARERLHGTLVEGRKIEVNNATARVMTNKKLVSPYPNGEALSTLPY
AGWKLSPMVQAMYGPELYAVPGFPYPSAAAAASTAAAFRGAHLRGRGRPVYSAVRAAMPQ
PALPAYPGVVYQDGGFYGAADLYGGYPAAAYRFAQPTAVTGATAAAAAAAYSDSYGRVYT
TDPYHALGPAAAAYGVGAMVRAPQPQHYNNRLETELSSLYASLYRAGYSRFAPY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatccataatgttacccgttactcggggaatgatggac
agggaaaatgacattgatacagcaaccggaccccactcgaacacgaccgggggtccagca
gcagtagtccggggaatgaaacgaggggatcctgagcaaacagctgcagctttgaccgaa
ttagcaggagcagagtgcaaacggccacggatagacgggacggtgggtgttggtgacatt
ggacagaacaacgaccctttaaccccaggtttccttggatacccacctcacagccagggt
tctcaagattcaacggggggccaggaggggctggtgcccccgcccttctcagcgttccct
ccaccaccccctccgcagaacggcctggggacagagtttggcggtgctttgtttggtgct
ggtgggcaggggccttcggactcaggggctggaacaaatggctcagccaccacttccaac
atcttacccaccccgcagacagaagtgtctccaggtcaggtagatggagtggggcagtgc
gtggcagtggaattagcaggagtatccggggctgactccgcagaggccaaaggaacccca
aaacgacttcacgtctccaacatccccttccgcttccgagaccctgacctcaggcagatg
tttgggcaatttgggaagattattgatgttgagatcattttcaatgagaggggctcaaag
ggctttggctttgtcacgtttgagaccagcgccgacgcggagaaagcccgggaaaggctt
catggcacgctagtggaaggtcgcaagatagaggttaacaatgccacggccagggtgatg
accaataagaagttggtcagcccctaccccaacggagaggcccttagcaccctgccatat
gcaggatggaagctaagcccaatggtgcaggcaatgtacggaccagagctctatgcagtt
ccggggttcccctacccgtctgcggcagcggcagcctccacggcggctgcgttccgtggt
gcccaccttaggggccggggaaggccagtgtacagcgcggtgcgtgcagcgatgccacag
cctgccctccctgcctaccctggcgtggtgtatcaggatggtgggttttatggagctgca
gacttatacggaggctatcctgccgctgcctatcgctttgctcagcctactgctgtaacc
ggggcaactgctgccgccgcagctgctgcttacagtgacagttatgggcgagtgtacact
acagatccctaccacgctctaggtcctgctgccgctgcctatggagtcggtgccatggta
agagccccccagccgcaacactacaacaacaggctggaaactgagttatcttcactttat
gctagtttatatcgggctggatacagtaggtttgctccatactaa
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