Salvelinus namaycush (lake trout): 120039480
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Entry
120039480 CDS
T07522
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like
KO
K14946
RNA binding protein fox-1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120039480
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120039480
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
120039480
NCBI-ProteinID:
XP_038840817
UniProt:
A0A8U0QDY8
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Position
Sna3:complement(77600822..77948223)
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AA seq
367 aa
AA seq
DB search
METPSWAGNTLCKSGSIAVFGNVVYSGLLNEHLWHLGVPLFTRLGNQEATNPPEAMAQPY
TPAQYPPPPQNGIPAEFAAPHPLPTQDYTGQTRVPEHAMTLYTPTQTHSEPPGTDNNTPA
ITANTTVQTDDVTQSEVSLQLQLQLSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGK
ILDVEIIFNERGSKGFGFVTFETSTDADRAREKLNGTIVEGRKIEVNNATARVMTNKKVA
NPYTNGWKLNPVVGAVYGPELYAVTGFPYPATGATVAYRGAHLRGRGRAVYNTFRTAPPP
PPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPTTAAAYSDSYGRVYATADPYHHTIGPAA
TYSVGTM
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagacccccagctgggcaggaaacaccttgtgtaaatcaggaagcattgctgtcttc
gggaacgtggtgtacagcgggctgctcaacgagcacctctggcatttaggagttcccctc
ttcacgagactgggtaaccaagaggccaccaaccccccagaagccatggcccagccgtac
acgcctgcccagtacccgcctcccccacagaatggcatcccggccgagtttgcggcacca
caccccctccccacgcaggactacaccgggcagaccagggtgcccgagcatgccatgacc
ctctacacccccacacagacgcacagtgagccgccgggcaccgacaacaacacgcccgcc
atcaccgccaacacgactgtacagacagatgacgtgacgcaatcagaggtctccctgcag
ctccagctgcagctctcggactcctcggagaagcagcagcccaagaggttacatgtctcc
aacatccccttccgcttccgcgaccccgacctgcggcaaatgtttgggcaatttggaaag
attctagatgtggagattatctttaatgagcgaggatccaagggctttgggtttgtaact
tttgaaacgagcacagatgccgaccgtgcgcgggagaaactaaacggtacaatcgtagag
ggacgcaaaatagaggtgaataatgcaacagcaagagtgatgacaaacaaaaaagttgcc
aacccgtacacaaatggctggaagctgaaccctgtggtgggagctgtctatggtcctgaa
ctgtatgctgtaacaggtttcccttacccggccacaggggctacggtggcctataggggt
gcccacttgcgaggccgggggcgggctgtgtacaacaccttccgcacagcacctccacca
ccacctattccagcctatggagcagtggtgtaccaggatggcttctacggagcagaaatc
tatgggggctacgctgcgtacagatacgcccagcccaccaccgctgctgcctacagtgac
agctatggcagagtctatgcaacagcagacccctaccaccacacaatcggccctgccgct
acatacagtgtggggaccatgtaa
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