Salvelinus namaycush (lake trout): 120040989
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Entry
120040989 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120040989
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120040989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
Fib_alpha
zf-RING_2
zf-RING_6
YscO-like
Spc24
Y1_Tnp
LMBR1
Motif
Other DBs
NCBI-GeneID:
120040989
NCBI-ProteinID:
XP_038841884
UniProt:
A0A8U0U660
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAQQGDLLDQDQFCCSVCLDLLKEPVTIPCGHSYCRSCIEGCWDQDVLKGVYSCPQCRHT
FTPRPTLMKNNMLAEVVEKLRKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLA
CLASYCETHLQPHYESPAFKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICLLCVM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKNLQKAVKSFKRSAQAAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAHTHLSLSEGNRKVTYTDQVQPYPDHP
DRFTYFWQVLCREGLSGRCYWEVEWSGAVYTAVSYKDISRTEEGNDGGFGDNNKSWSLLC
YTCGYCFRHNNVETKVSGTQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQTLYP
GFRFGYFHLFSGSAELIN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagatctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcaccatcccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagacatacc
ttcactccaaggccaacgctgatgaaaaataacatgttggctgaggtggtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggcg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttcaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgctgtgtgtgatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgaaaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggaaagagagaaggagctg
aagaatctccaaaaagctgtgaagtctttcaagcgctctgcacaggcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacacacacctctctctg
tctgaagggaacagaaaggtgacctatacagaccaagtccaaccatatcctgaccatcca
gacagattcacatacttctggcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggtgctgtttatacagcagtctcatataaagacatcagcaga
acagaggaaggtaatgatggtggatttggagacaataacaagtcctggagtttactgtgc
tatacatgtggttattgtttcagacacaataatgttgagactaaagtatcaggcactcag
tcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtc
tctgacacaatgaccctcctccacagagtccagaccacattcactcagaccctctatcct
gggtttaggtttggatattttcaccttttctctggttctgctgagctgataaactga
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