Salvelinus namaycush (lake trout): 120041010
Help
Entry
120041010 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120041010
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120041010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
Fib_alpha
zf-RING_6
zf-RING_10
YscO-like
Y1_Tnp
zf-RING_5
LMBR1
Spc24
Motif
Other DBs
NCBI-GeneID:
120041010
NCBI-ProteinID:
XP_038841906
UniProt:
A0A8U0U7S5
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAQQGDLLDQDQFCCSVCLDLLKEPVTIPCGHSYCRSCIEGCWDQDVLKGVYSCPQCRET
FTPRPNLRKNNMLAELVEKLRKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLA
CLASYFETHLQPHYEFHPLKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSTAAERNEKQRQLGMSQQKVQQRFQEREKELKELQQAVESFKRSAQAAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKSVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAYTHLSLSEGNRKVTYTDQVQPYPDHP
DRFTNWCQVLCREGLSGRCYWEVEWSGDVFVTAVSYKDISRTETGIGSAFGFNNKSWSLN
YYSGGYCFRHNSVQTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQTLY
PGFSLNGTAELVKL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagatctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactattccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctacagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagctggtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggca
tgtctggcctcttactttgagactcacctccaacctcactatgaatttcatcctttgaaa
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacagtgtcaactgcagcagagaggaatgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacaggcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagtct
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcatacacacacctctctctg
tctgaagggaacagaaaggtgacctatacagaccaagtccaaccatatcctgaccatcca
gacagattcaccaactggtgtcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggagtggtgatgtttttgttacagcagtctcatataaagacatcagc
agaacagagacagggataggtagtgcatttggattcaataacaagtcctggagtttaaat
tactatagtggtggttattgtttcagacacaatagtgttcagactaaagtatctggccct
cagtcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagt
gtctctgacacaatgaccctcctccacagagtccagaccacattcactcagaccctctat
cctgggtttagtctcaatggtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
