Salvelinus namaycush (lake trout): 120041019
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Entry
120041019 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120041019
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120041019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
zf-C3HC4
zf-C3HC4_3
U-box
Fib_alpha
zf-RING_2
zf-RING_6
Wtap
zf-RING_5
Y1_Tnp
Spc24
NBP1
Motif
Other DBs
NCBI-GeneID:
120041019
NCBI-ProteinID:
XP_038841915
UniProt:
A0A8U0QEM6
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHSYCRICIEGCWDQDVLKGDYSCPQCRET
FTPRPNLRKNNMLADMVEKLRKTGLQAAPPPALCYAGPGDVACDFCTGTRKQEALMSCLA
CLVSYCETHLQPHYEFPALKKHKLVKATAQLQEKICSHHDKLLEVYCRTEQQCICLLCVM
DEHKGHDTVSAAAERTEKQMQLGMSQQKVQQIFQEREKELKELQQAVESFKRSAQSAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTANTLLSLSEGNRKVTYTDQVQPYPDHP
DRFTNYWQVLCREGLSGRCYWEVEWTGKWVVVTAVSYKDISRTERDGGFGDNNKSWSLEC
SSGGYYFRHNNVVTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYP
GFCLCFGTAELVKL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccagtcaccatcccctgtggacacagttactgtaggatctgtattgag
ggctgctgggatcaggatgttctgaaaggggactatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgatatggtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcaggaagccctcatgtcctgtctggca
tgtctggtatcttactgtgagactcacctccaacctcactatgaatttcctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgaacagcagtgtatctgtctgctgtgtgtgatg
gatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagatg
cagctggggatgagtcagcagaaggtccagcagatattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacagtcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcaaacacactcctctctctg
tctgaagggaacagaaaggtgacctatacagaccaagtccaaccatatcctgaccatcca
gacagattcaccaactactggcaggttctgtgtagagagggtctgtctggacgctgttac
tgggaggtggagtggactgggaagtgggttgttgttacagcagtctcatataaagacatc
agcagaacagagagagatggtggatttggagacaataacaagtcctggagtttagagtgc
tctagtggtggttattatttcagacacaataatgttgtgactaaagtatcaggccctcag
tcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtc
tctgacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcct
gggttttgtctctgttttggtactgctgagctggttaaactgtag
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