Salvelinus namaycush (lake trout): 120041021
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Entry
120041021 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120041021
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120041021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
Fib_alpha
U-box
zf-RING_6
zf-RING_2
YscO-like
zf-RING_5
DUF5581_N
Y1_Tnp
TMPIT
Exonuc_VII_L
LMBR1
Motif
Other DBs
NCBI-GeneID:
120041021
NCBI-ProteinID:
XP_038841918
UniProt:
A0A8U0QDZ3
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MAQQGLLLDQDQFCCSVCLDLLKEPVTTACGHNYCRICIEGCWDQDDLKGVYSCPQCRET
FTPRPNLRKNNMLAELVEKLKKTGLQAAPLPALCYDGPGDVACDVCTGTRKQKALMSCLV
CLASYCETHLQSHYEFPALKKHKLVKATAQLQDKICSHHDKLLEVYCRTDQQCICYLCTM
DEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESFKRSAQAAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQYFGDVSKTVSELREKLEDFLKGEWTKISTTVNIVDVVLPPEPKTREQLLQY
SCQLTLDPNTVNTRLSLSEGNRKVTFTRQVQPYPDHPDRFTNQWQVLCREGLSGRCYWEV
EWAGEWVNTAVSYKDISRTEEGNDGAFGFNNKSWSLQCSSDGYCFRHNNVETKVSGPQSS
RVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQTLYPGFRLYGTAELVKL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggacttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcctgtggacacaattactgtagaatctgtattgag
ggatgctgggatcaggatgatctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttggctgagctggtggagaaactg
aagaagacaggactccaggctgctccccttcctgctctgtgctatgatggacctggagat
gtggcgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaatctcactatgaatttcctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggataagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaacataaaggccatgatacggtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacaggcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagtactttggagatgtgagtaagactgtgtctgaa
ctgagagagaaactagaagacttccttaaaggagaatggaccaagatctccactacagtg
aatatagtggatgttgtactgcctccagagcccaagaccagagaacagttgttacaatat
tcctgtcagctcacactggacccaaacacagtaaacacacgcctctctctgtctgaaggg
aacagaaaggtgacctttacacgccaagtccaaccatatcctgaccatccagacagattc
accaaccagtggcaagttctgtgtagagagggtctgtctggacgctgttactgggaggtg
gagtgggctggggagtgggttaatacagcagtctcatataaagacatcagcagaacagag
gaaggtaatgatggtgcatttggattcaataacaagtcctggagtttacagtgctctagt
gatggttattgtttcagacacaataatgttgagactaaagtatcaggccctcagtcctcc
agagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtctctgac
acaatgaccctcctccacagagtccagaccacattcactcagaccctctatcctgggttt
aggctctatggtactgctgagctggttaaactgtag
DBGET
integrated database retrieval system
