Salvelinus namaycush (lake trout): 120041022
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Entry
120041022 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120041022
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120041022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
U-box
zf-RING_2
Wtap
YscO-like
Fib_alpha
Y1_Tnp
Spc24
DUF445
LMBR1
Motif
Other DBs
NCBI-GeneID:
120041022
NCBI-ProteinID:
XP_038841919
UniProt:
A0A8U0U7J2
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTIPCGHNYCRICIEGCWDQDVLKGVYSCPQCRET
FTPRPTLMKNNMLAELVEKLRKTGLQAAPPPALCYAGPGDVACDVCTGTRKQKALMSCLV
CMVSYCETHLQSHYESPALKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICMLCTM
YEHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESFKRSAQSAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAHIDLSLSKRNRKVTCTGQVQPYPDHP
DRFTNYQEEQVLCREGLSGRCYWEVKWSWDVETAVSYKDISRTETDGGFGFNNKSWSLLY
YSGGYCFRHNNVKTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYP
GFRLYDYNDTAELVKL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttctgctggaccaggaccagttctgttgttctgtctgtctagat
ctactgaaagaaccggtcaccatcccctgtggacacaattactgtagaatctgtattgag
ggctgctgggatcaggatgttctgaaaggggtctatagctgtcctcagtgcagagagacc
ttcactccaaggcctacgctgatgaaaaataacatgttggctgagctggtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtatggtctcttactgtgagactcacctccaatctcactatgaatctcctgctttgaag
aagcacaagctggtcaaagccaccgcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtatgctgtgtacaatg
tatgaacataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacagtcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacattcatttcctccagagttatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtattgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacatagacctctctctg
tctaaaaggaacagaaaagtgacctgtacaggccaagtccaaccatatcctgaccatcca
gacagattcaccaactaccaggaggagcaggttctgtgtagagagggtctgtctggacgc
tgttactgggaggtgaagtggagttgggatgttgaaacagcagtctcatataaagacatc
agcagaacagagacagatggtggatttggattcaataacaagtcctggagtttactgtac
tatagtggtggttattgtttcagacacaataatgttaagactaaagtatcaggccctcag
tcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtc
tctgacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcct
gggtttaggctctatgattataatgatactgctgagctggttaaactgtag
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integrated database retrieval system
