Salvelinus namaycush (lake trout): 120043818
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Entry
120043818 CDS
T07522
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120043818
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120043818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
DUF6468
Motif
Other DBs
NCBI-GeneID:
120043818
NCBI-ProteinID:
XP_038844342
UniProt:
A0A8U0QKU6
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All DBs
Position
Sna3:complement(97211866..97219136)
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AA seq
700 aa
AA seq
DB search
METLVIKKEENTEESHPTTGSKDVTTSMKDMWDLNLNQEQEDPTTTHNKPGENTQPQNQE
QEDPTTMHNKPGENTQPQNQEQEDPTTTHNKPGENTHPQNQEQEDPTTTHNKPGENTHPQ
NQEQEDPTTTHNKPGENTQPQNQEQEDPIRTHDKPGKITHPQNQEQEDPIRKHDKPGENI
QPQTISSGFTVTAEDVLCDSCIQIPCQAQKSCLTCLVSYCEAHLRPHLENQRFQNHRLVE
PLQDIECRTCEEHRLPLELYCLTDGCGVCVCCECEGQGHLGHSTVPVEEARRQIQTELQK
KQGEIMKTVSVAENAVGKLQSNTASIESSVAGVRAVMEQQFYLLQGAVEEARRRATEVLE
GEQRQALSQAEGIQAHLEQKSQELKKTLARVERLFRNKRDVDFLQEYSEWKTGAVDVCLP
GLYVGLTDRLASFSCLLTESTQELCDQLKATYRDKLKDICRTEKLGVTTMVHPKMSRSFS
LPEPEMRDDFLTYASSLTFDPDTVHKFLRLTEDDRKVTNTTPWQHSYPDMPERFEYWRQV
MTSESFYLGRHYFEAELSGEGVHVGLTYKSIDRKGVERGSCITGNDFSWSLGREGRSFST
WHADMEAVVEATSVFTRIGVYIDFDSGSLAFYGVTDVAMTLLYRYKAEFMEPLYPTVWLS
KKDSVVLLVGPKDPPLMKSSTLPATPITPMATSAPVTPES
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctcgtcatcaagaaggaagagaatacagaagagagtcatcccacaactgga
agcaaagatgtcaccacatccatgaaagacatgtgggatctgaacctaaaccaggaacaa
gaggacccaacaacaacgcacaataagccaggggagaacacccagcctcagaaccaggaa
caagaggacccaacaacaatgcacaataagccaggggagaacacccagcctcagaaccag
gaacaagaggacccaacaacaacgcacaataagccaggggagaacacccatcctcagaac
caggaacaagaggatccaacaacaacgcacaataagccaggggagaacacccatcctcag
aaccaggaacaagaggacccaacaacaacgcacaataagccaggggagaacacccagcct
cagaaccaggaacaagaggatccaataagaacgcacgataagccagggaagatcacccat
cctcagaaccaggaacaagaggacccaataagaaagcacgataaaccaggggagaacatc
cagccccagacaatctctagcgggtttactgtcaccgcagaagatgtgctgtgtgactcc
tgcatccagatcccgtgccaggcccagaagtcctgcctcacctgcctggtgtcgtactgc
gaggcccacctcagaccccacctggagaaccagaggttccagaatcaccgactggtggag
cccttacaggacatcgagtgtcgcacctgtgaggagcaccggctgccgcttgaactatac
tgcctgacggacggctgcggtgtgtgtgtgtgctgcgagtgtgagggacaggggcatctg
gggcacagtactgtacctgtagaggaggctcgaagacagatccagacagagctgcagaag
aaacaaggggagattatgaagaccgtctcagtggcagagaatgccgttggcaagctacag
agcaacactgcatccatagagagctcggtggcaggggtacgtgctgtgatggagcagcag
ttctacctgctgcaaggggccgtggaagaggcccggaggagggccacggaagttctggag
ggggagcagaggcaggcgctcagccaggccgagggcatccaggcccacctggagcagaag
agccaagagctgaagaagaccctggccagagtggagagactcttcaggaacaagagggac
gtggacttcctgcaggaatactcagagtggaagacgggggcggtggatgtctgtctgcct
gggctctacgtcggcctcacagatcgcctggcctccttcagctgcctgctcactgagtcc
acccaggaactgtgtgaccagctcaaggctacctacagagacaaactgaaggacatctgc
aggactgagaaactgggcgttacaaccatggtccatcccaagatgtcaaggtctttttca
ctgcctgagcctgagatgcgagacgacttcctcacgtatgccagcagtctgacctttgac
ccagacactgtccacaagttcctgagactaaccgaagacgacaggaaggtgaccaacacc
acgccctggcagcacagctacccagacatgcccgaacgcttcgagtactggcgccaggtg
atgacctcagagagcttctacctgggccgacactactttgaggcagagctgagtggggag
ggcgtgcacgtgggactcacctacaagagcatcgaccggaaaggcgtggagagaggcagc
tgcatcacaggaaatgacttctcgtggagcctcggaagggaggggcggagcttttccact
tggcatgctgatatggaggcggtcgtggaagccacaagtgtgttcacgaggatcggcgtc
tacatcgactttgactcgggctcattagctttctatggtgtgactgacgtcgctatgaca
ctcctctacaggtacaaggctgagttcatggagcccttgtatcctactgtctggctctca
aagaaggacagtgtggtgttattggttggtcctaaggaccccccactaatgaagagctca
actctgcctgccacccccatcactcccatggcaacatcagctcctgtcactccggaatca
taa
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